Pseudoalteromonas viridis: J5X90_20660
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Entry
J5X90_20660 CDS
T07232
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J5X90_20660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvb03000
]
J5X90_20660
03400 DNA repair and recombination proteins [BR:
pvb03400
]
J5X90_20660
Enzymes [BR:
pvb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
J5X90_20660
Transcription factors [BR:
pvb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
J5X90_20660
DNA repair and recombination proteins [BR:
pvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J5X90_20660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
DAO_C
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QTL38154
LinkDB
All DBs
Position
2:complement(565477..566859)
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AA seq
460 aa
AA seq
DB search
MFSSEVCEKARKSRDARFDGLFYVAVKSTGIYCRPICPAPAAKEHNVVYYQHGHSAAQAG
FRPCIRCRPDSAPGSYAWMGTQTTAVRAKRMIDNGFLSGASVEQLAEKLGITARYLGKLF
QQYYGIAPKQYALFKQCDLAKQLLQQTALPVTEVAYACGFNSQRRFNDAFSRLYQITPSS
LRRGAEANRQIELMMAFRPPYNWQLLREFLAHRLIRGLEWLDDSSYGRNFTLGAYHGRFS
AYFEGEQNRFRVLIEMNDLKGLPQVVSNIRRILDLDADAVFINAHLQQHCDGIVLQEGLR
LPGIWAPFEAGIRAILGQQISVVAAKNLMIQLVEALGEPLQDGTYQFPGPAAIAASELAF
FKMPERRKQAIIALSQHYVDAPDCAPESWLAIKGIGPWTVDYAKMRGLSAPDIYLGGDLG
VQKAIDKVGQIDEPGCAPFRSYLTFHLWQQLAQTSTHAKE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctcagaagtttgcgaaaaggcacgaaaaagcagagatgcgcggtttgatggg
ttattttatgtggcggtgaaaagcacaggtatttactgtcgcccaatttgccctgcaccg
gcggcaaaagaacacaacgtagtttattatcagcacgggcattcggccgctcaggctggt
ttcaggccctgtattcgttgtcggccagatagcgcaccgggcagttatgcctggatgggc
acgcaaaccacggcggttcgggcaaagcgcatgatagacaatggcttcctaagcggtgca
agtgttgagcagctggccgaaaaactggggatcacggcacgttatctgggaaaactattt
cagcagtattatggcatagcgcccaaacaatatgctttgtttaaacagtgcgatctggcc
aagcaattgttgcagcaaacggccttgccggtaactgaggttgcctatgcctgtgggttt
aactctcaacgccgttttaacgacgcattcagccgactatatcagataacgccatccagt
ttacggcgcggggctgaggccaatcgccagattgagttgatgatggcgtttcgcccgccc
tacaactggcaattgcttagggagtttctagcacaccgactgatcaggggactggaatgg
ttagacgacagcagttacggtcgtaattttacgctgggcgcgtatcatgggcgctttagc
gcgtactttgagggcgagcagaaccgcttcagagtattgattgaaatgaatgatctaaaa
ggcttgcctcaggtggtgagtaatattcgccgcattttagacctggatgccgacgctgtg
tttatcaacgcgcatttacagcagcattgtgatgggatagtgctgcaagaggggctcaga
ttgcctgggatatgggcaccgtttgaggccggcatacgtgccatactggggcagcaaatc
agtgtggtggcggctaagaacctgatgatccagctggttgaagcactgggtgagccacta
caagatggcacctaccagtttcccggtcccgcagcgatagcggcatctgagctggcgttt
tttaaaatgcccgagcgccgtaaacaggctatcatcgcactgtcacaacattatgtggat
gcgccggattgcgccccagaatcctggctggcaatcaaaggcataggcccctggactgtc
gattacgcaaaaatgcgcggcctgagtgcaccggatatttatctggggggggatttgggc
gtgcaaaaagcgattgataaggtaggacagatagacgaaccaggctgcgccccattcaga
agctatctgacctttcacttatggcaacaactggcacagacaagcacccacgcaaaggag
taa
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