Pseudoalteromonas viridis: J5X90_20835
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Entry
J5X90_20835 CDS
T07232
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvb03400
]
J5X90_20835 (vsr)
DNA repair and recombination proteins [BR:
pvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
J5X90_20835 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
QTL38188
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All DBs
Position
2:611571..612095
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AA seq
174 aa
AA seq
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MGVHIRKTRSKNMRAISSTNTAIESTVKAFLEALSLKFVPQPKHIPGNPDFFVNDLNIAI
FCHGCFWHAHDCALFKLPGTRQEFWQAKLHDNTIRDRKALCQLHACGIRTLVIWECAVKG
KEKLLPSVLPLLISTWLQGMHNIGIIDGTGLMNCQSPQEVTYQDLLRSHTNHMN
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcacattagaaaaactcgcagtaaaaacatgcgtgccattagttccacaaac
acagctatagagagcactgtaaaggcattcttagaagcactcagtctgaaatttgtgccc
caaccaaagcatattccgggaaaccctgatttttttgtaaatgacttaaacatagctatt
ttttgccacggatgcttctggcatgctcacgactgcgctttgtttaagctacctggaacc
cggcaagaattttggcaagcaaaactccacgacaataccataagagatagaaaagcactc
tgtcagctgcatgcctgcgggatacgtacactcgttatttgggagtgcgctgtaaaagga
aaagaaaaactactgccctctgttttaccactattgatatcaacatggctccagggaatg
cacaatatcggaataattgatggaactggcctaatgaattgccaatcacctcaggaagtt
acatatcaagacttacttcgctcccacacaaaccatatgaattaa
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