Pseudoalteromonas viridis: J5X90_21705
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Entry
J5X90_21705 CDS
T07232
Name
(GenBank) hypothetical protein
Organism
pvb
Pseudoalteromonas viridis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
CBM_5_12
Endostatin
Motif
Other DBs
NCBI-ProteinID:
QTL37465
LinkDB
All DBs
Position
2:complement(881334..885497)
Genome browser
AA seq
1387 aa
AA seq
DB search
MFKVNALAAMIAAASAISMPAISAQLNHQGTLTNSNTQEVVNDTLTITFTLYANEQSLWQ
EVREVQVVDGQYSVRLGENNDIDAAIFQNTELELGIKVGDDIEMSPRLRIDAVPSAYYAD
VSGSVKGAVDATQVSVAGIPVINENGEWVGSTVGLKGDPGADGRDGVDGKDGIDGKDGAD
GQDGAPGANGLDGAKGDKGDQGEKGDQGEKGDQGEKGDQGEKGDQGEKGDKGLQVKGAWT
ELAAYVVDDLVSFNGSAYIAIADVAAVEEGGDANPSPDVATQWLQLVAKGEQGEAGADGK
DGADGRDGAAGEKGDRGEKGDPGEKGEQGAKGDQGAKGDPGAKGEQGEKGERGEKGDPGE
QGERGEKGERGEKGEKGDKGDRGLTIKGTWSAELAYKADDVVVYEGQAYVARVDIIATEE
SGSVNDVPSASNDWLSLFAGVGSGLPGKDGLDGKDGKDGLPGRDGVDGQKGERGEKGDPG
AKGEKGDKGERGEQGERGEKGDPGAKGEKGDKGERGERGERGEKGDPGAKGEKGDKGDRG
LTVKGEWSAESAYSTDDVVVHEGQAYIARVEILTTEESGTVNLAPALSPDWLSLFAGVGS
GMPGKDGLDGKDGAPGKDGVDGTPGKDGAPGKDGAPGKDGVDGAPGKDGAPGKDGAPGKD
GAPGKDGVDGAPGKDGAPGKDGAPGPKGLQVKGDWNAQSGYQVDDVVTFEGSAYIASVTV
TETDGVNLSPEQDTQRWQLLVAKGSAGINFIASGYLLTTEYQAGDVISYMGSAFIATQEV
VGVPPLDSQNNIQQPWSILAKGVDYDVEQLVKRTELPDFTSFALSSDVTRVLTNYVTETQ
FNQALSTKANQSDIDTALATKANQSDVNTALATKANQSDVNTALATKANQSDVNTALATK
ANQSDVNTALATKANQSDVNTALATKANQSDVNTALATKANQSDVNTALATKANQSDVNT
ALAAKANQSDVDTALATKANQSDVDTALAAKANQSDVDTALATKANQSDVNAALAAKANQ
SDVDTALASKANQSDVDTALATKANQSDVETALAAKANQSDVNTALAAKANRSDVNTALA
TKANQSDVDTALAAKANQSDVNTALAAKANRSDVNTALATKANQSDVDTALAAKANQSDV
DTALSAKANQADMLTALASTLKFTPAKLAWSSEHAYQTGEVARVALSNSLYVATQEITAT
SSEKSPLLDKERWTLLIKGAESSVKNVIFVTSTEQTGNLGGISGANNICNTLANSANSKV
PSGTYKALLNSAYYVVDRFATVYNINGDVVANTGSALWQTHGIPLQAGIVYDENGNDVSG
SRVWTNMSDRGSSLNWNACNSWTSDSPYDLYSYAGAMTGIVGGTYSRWVYNSNLSCDQQA
RLYCVKQ
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagttaatgcgttagccgcaatgattgctgctgccagtgctatctctatgcct
gcaatttcagcacaactaaaccaccaaggtacattgactaactcaaatacacaagaggtc
gtcaatgatactttaaccatcacatttacactttatgccaatgagcaaagcttgtggcaa
gaagtcagagaagtccaggttgtcgacggtcaatatagtgtccgtcttggtgaaaacaac
gacattgatgccgctatttttcaaaatacggaattagagcttggcattaaagtcggagac
gatattgaaatgtctccccgattacgtatcgatgctgtccctagtgcatattatgctgat
gtatctggctcagtgaaaggggcggttgatgcgactcaagtttccgtcgccgggatccca
gtgatcaatgaaaacggtgaatgggttggttctactgtcggcttgaaaggtgatcctggc
gctgatggtcgcgatggtgttgacggtaaagatggcattgacggcaaagacggagcagat
ggtcaagatggtgcaccaggagcgaatggccttgatggtgctaagggtgacaaaggcgac
cagggtgaaaaaggcgaccagggtgaaaaaggcgaccagggtgaaaaaggcgaccagggt
gaaaaaggcgaccagggtgaaaaaggcgataaaggtcttcaggttaaaggtgcctggaca
gagcttgcagcctacgtcgttgacgatttagtgagttttaatggtagtgcttacattgct
atagcagatgtcgctgccgtagaagagggtggcgacgcaaatccatcgccagatgttgca
acacaatggttgcaactggttgcaaaaggcgagcaaggtgaggccggagcagacggtaaa
gatggcgctgatggccgtgacggagccgctggagaaaaaggcgaccgaggcgagaaaggc
gaccctggcgagaaaggtgaacagggcgctaaaggtgatcaaggcgcgaaaggtgaccct
ggtgccaaaggtgagcaaggtgaaaaaggcgagcgcggagagaaaggagatccgggtgag
caaggtgagcgaggtgaaaagggtgagcgaggcgaaaagggtgaaaaaggtgacaagggt
gatcgtggcctgaccatcaaaggcacctggtccgccgaattggcctacaaagcggacgac
gtggttgtctatgaaggacaagcctatgttgcccgggtagatatcattgctacagaggaa
tctggctcggtgaatgatgtgccgtctgcttccaacgactggttatcactgttcgctggt
gtaggctctggtttgcctggcaaagatggtcttgacggtaaagatggtaaagatggttta
ccgggtcgggacggtgtggatggccaaaaaggtgaacgcggcgaaaaaggtgacccaggc
gccaaaggcgaaaaaggcgacaaaggtgaacgcggtgaacaaggtgaacgcggcgaaaaa
ggtgacccaggggccaaaggcgaaaaaggcgacaagggcgagcgcggtgaaagaggcgaa
cgcggcgaaaaaggtgacccaggtgccaaaggtgaaaagggtgacaaaggtgatcgcggc
ctgacagtcaaaggcgagtggtcagctgaatcagcctatagcacggatgacgtggttgta
catgaaggtcaggcttatatcgcacgtgtagagattctgacgactgaggagtcaggaaca
gttaatcttgctccggcattgtccccagactggttgtctctgtttgcaggagtaggttca
ggtatgcctggtaaagatggactggatggtaaagatggcgctccaggcaaagacggtgtt
gacggtaccccgggtaaagatggcgcaccaggtaaagatggcgcaccgggtaaagatggt
gttgacggtgctccgggtaaagatggcgcaccaggtaaagatggcgcaccaggtaaagat
ggcgcaccaggtaaagatggtgttgacggtgctccgggtaaagatggcgcaccaggtaaa
gacggtgctcctggtccaaaagggctgcaagtaaaaggagattggaatgcacaatctggt
tatcaggttgatgatgtcgttactttcgagggcagtgcatacatagcatcagtaactgtc
acagaaacggatggtgttaatctgtctcctgagcaggatacacagcgctggcaactgctg
gtagctaaaggttcagcaggcataaactttattgcctctggttatctattgaccacagag
tatcaggcaggagatgtaattagctatatgggtagtgcgtttatagcgactcaggaagtt
gttggtgtgccgccactggattcacaaaacaatattcaacagccttggtctattctagct
aagggggttgattacgacgttgaacagctggttaagcgtacagagctaccagactttacg
tcatttgcgctaagctcggatgtgactcgagtgttgaccaactatgtcacagaaacgcag
tttaatcaggcgttgtcaaccaaggcgaaccagagcgatatagacactgcgctggcaacc
aaagcaaaccaaagcgacgttaatactgcgctggcaaccaaagcaaaccaaagcgacgtt
aatactgcgctggcaaccaaagcaaaccaaagcgacgttaatactgcgctggcaaccaaa
gcaaaccaaagcgacgttaatactgcgctggcaaccaaagcaaaccaaagcgacgttaat
actgcgctggcaaccaaagcaaaccagagcgacgttaatactgcgctggcaaccaaagca
aaccagagcgacgttaatactgcgctggcaaccaaagcaaaccagagcgacgttaatact
gcgctggctgcgaaggcaaaccagagtgatgtggatactgcgctggcaaccaaggcaaac
caaagtgatgtggatactgcgctggcagcgaaggccaaccagagcgatgttgatacagca
cttgcaaccaaagcaaaccaaagcgacgttaatgctgcgctagccgcgaaggcaaaccag
agcgatgttgatacagcacttgcaagcaaagcaaatcagagcgatgtagacactgcgctg
gcaaccaaagccaatcaaagtgatgtcgaaactgcgcttgcagcgaaggcgaatcagagt
gatgtaaacactgcacttgcagcgaaggcgaaccggagcgacgttaatactgcgctagca
acgaaggcgaaccagagcgatgttgatactgcgcttgcagcgaaggcgaaccagagtgat
gtaaacactgcacttgcagcgaaggcgaaccggagcgacgttaatactgcgctagcaacg
aaggcgaaccagagcgatgttgatactgcgctagctgcgaaggcgaaccaaagtgatgtc
gatactgcgctgtcagcaaaagcaaatcaagctgatatgctaacagccctggcttctacc
cttaagttcacgccagctaagcttgcctggtcttctgaacacgcctatcaaactggagaa
gtagcacgtgtagcgcttagcaatagtctctatgtcgcaactcaggagattaccgctaca
agctcagaaaaatcgccgctattggacaaagagcgctggaccttgttaatcaaaggtgct
gaatcaagcgttaaaaatgttatctttgtaacaagtactgaacaaacaggtaaccttggt
gggatcagcggtgcaaacaatatctgtaatacattggccaatagtgccaactctaaggtt
ccgtcaggcacgtataaagccctgctgaactctgcgtattacgtagtagaccgctttgca
actgtctataacattaacggggatgttgttgctaataccggttcagctttgtggcaaacg
cacggaataccattacaagccggaattgtatatgatgaaaacggcaatgatgtatcaggg
tctcgtgtatggacaaatatgagtgatcgcggaagttcattaaattggaatgcatgtaat
agctggactagtgactctccttatgacctatattcatatgctggagctatgacgggcatt
gtcggaggaacatattctaggtgggtgtacaacagtaaccttagttgtgatcaacaagcg
cgcctttactgtgtaaaacagtaa
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