KEGG   Pseudoalteromonas viridis: J5X90_23210
Entry
J5X90_23210       CDS       T07232                                 
Symbol
cas3
Name
(GenBank) CRISPR-associated helicase Cas3'
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
pvb  Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:pvb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pvb02048]
    J5X90_23210 (cas3)
Enzymes [BR:pvb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J5X90_23210 (cas3)
Prokaryotic defense system [BR:pvb02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    J5X90_23210 (cas3)
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD HD ResIII Cas3_C AAA_19
Other DBs
NCBI-ProteinID: QTL37748
LinkDB
Position
2:complement(1279403..1282288)
AA seq 961 aa
MSDFNSEIFQFWGKADEHNTLPAVCHMLDVAFVARAIILKLAAQERAILLKPFLAIEGVD
EDTAIAMVVLLIAVHDIGKITPGFQYKLPFERIRRLFDTQRYDLKNASETQHGTSGYKIL
SNWAESIGLSCYTEKPLFSSVASHHGEFVTDSKNGRVWGKGYIWEKVQLASIEWLFDYFL
VDVSLLCEIDDELLTPTWYVYMAGLCSVADWIGSDHHYFTYISSDEYFANVALRVETAHR
LADKLNIKHVKAAQSIIEFNKVFGFKPNALQQSILALFNSQELPWLTVIESGMGSGKTEA
ALILADHFIRNLDHSGLYVAMPSQATANQLYKRTLKFLKHESLGYEDIETHLKHSNAEFN
PAYEGLLLSSIEDLNEQNAVKANLWFTAKKRGLLAGACVGTIDQLLMAAMRYKHNFVRLF
AIANKTVILDEVYALDYFQLSLLKNTLRWMAKLKVRVIILSATLPKLMLRELVQAYGQEF
GKNIELKEAAYPRLTTYSGGQLATSVHVAEGKNTDELASPPKRFGIQLHKTTPQQCVEQM
ASDVLARVKEAGCGVFVCILNTVNAAQALSEIILEQCNRKESQNMQCLVFHARYPIGNRL
AIEDMVEYLVGKNPGDRKAVNPNRPVKDQCLILIGSQVLEQSLDYDACEMFTQVAPIDLI
MQRLGRIWRHQVNNPFRSKLVQSPRLNVYLPGLDEIPEDYAKWLGYADVKIYPSHILGVT
TRLLWEEAASTGKNNGFELDLDTEIDDWVNNVYTDIEQQADWLKQEQEKAFEFELEKKLV
YRLANNMMFDADQEDVSDLLDYLNDQFDDEDLVLSTRLASLSVQIILLIQNEDGSLVPIT
EYQPYLQQCQTPMRENAPYEAINWRADKRFNKNDIGRLKQSLVKLSHADWVEHFREVESN
WPFNFVAQDVWQRTSQLHCCVPVILDQHFTYSVPSIGTLKLDPVLGLKVEKCRSSHNHSK
R
NT seq 2886 nt   +upstreamnt  +downstreamnt
gtgagtgattttaatagcgagatttttcagttctggggcaaggccgacgagcacaatacg
ttacccgcagtgtgtcatatgctggatgtcgcctttgtggcccgggcgattattctcaaa
ctggcagctcaggagcgggctattttactcaagccgtttttagctattgaaggcgttgat
gaagatacggcgattgctatggtagtactgcttattgccgtgcatgatattggcaagatc
acaccgggttttcagtataagttgccatttgaacgtatcagaaggctgtttgatactcag
agatacgatcttaagaatgcaagtgaaactcaacatggtacgtctggttacaagatatta
tcaaactgggcagaaagtatcggcctaagttgctacaccgaaaaacctttgttctcctct
gtcgcaagtcatcatggagaatttgtaaccgattcaaaaaatggtcgagtttggggaaaa
ggttatatctgggaaaaagttcagctagcttcgattgaatggctattcgactactttctg
gttgacgtttcactgctttgtgaaattgacgatgaactgctcacacccacctggtacgtc
tatatggctggactatgctcggttgctgactggattggctccgatcatcactattttacc
tacatcagttctgatgagtattttgccaatgttgcgctgcgtgttgagacggcacaccgg
ctggcagataagctgaacattaagcatgtaaaagctgcacagagtatcattgaattcaat
aaagtctttggctttaaacccaacgcactgcagcaaagcatattagccttatttaactca
caagaattgccctggctgacagtgattgaaagcggtatgggaagcggaaaaacagaagct
gcactcatactggctgaccattttattcgtaacctggatcactctgggctgtatgtggct
atgccatctcaggctacggcgaatcaactctataaacggacattgaagttcctgaaacat
gagtctttgggttatgaggacatcgaaacccatttaaagcacagtaacgcggagtttaac
ccagcttatgagggcttattgctgtccagtattgaggatctgaatgagcaaaatgccgta
aaggcaaacttatggtttacagctaaaaaaagagggttactggccggagcttgtgttggc
accattgatcaactgcttatggctgctatgcgttacaagcataattttgtgcggttattc
gctattgcgaacaaaaccgtaatattagatgaggtatatgcactggattacttccagctt
tctttgctcaaaaacacgttacggtggatggcaaaactgaaagtcagggtaatcatatta
tctgctactttacctaaactaatgctccgagagttagtgcaggcttatggccaggagttc
ggtaagaatattgagctaaaagaggctgcctatccgaggcttacaacttatagcggaggg
cagttggcgacatctgttcacgttgcagaaggtaaaaatactgatgagctggcttcacca
cctaaacggtttgggattcagttgcataaaaccacgccacaacagtgtgttgaacagatg
gcaagcgatgttttggcacgcgtaaaggaggcgggatgcggtgtatttgtgtgtatcctg
aatacggtaaacgcggcgcaggcactcagtgaaattatccttgagcaatgcaatcggaag
gaaagtcaaaacatgcagtgtctggtgtttcatgccagataccccatcggtaaccgctta
gccatcgaagacatggttgaatatctggtaggcaagaatccgggagatcgaaaagcggtt
aatccaaatcgacccgtcaaagatcagtgtttaattttaattgggtcccaagttttggaa
cagagtttggattatgacgcctgtgagatgtttactcaggtcgcacccattgatctgatc
atgcaacggctagggcggatatggcggcatcaggtaaataaccctttcaggtctaagctt
gttcaaagcccgagacttaatgtctatttgccggggttagatgagatccctgaagactac
gctaaatggcttggatacgccgatgtcaaaatttacccgtcgcatatactcggggtaacg
acccgtttgctgtgggaggaagctgcaagtacagggaagaataacggtttcgagttggat
cttgatacagagattgatgattgggtaaataacgtatacaccgatattgagcagcaggcg
gactggttgaagcaggagcaagaaaaagcgtttgaattcgagcttgaaaagaagctcgtg
taccggcttgctaacaacatgatgttcgatgcagaccaggaagatgtatcggatttgctg
gattatctaaatgatcagtttgatgatgaggacttggttttatcgacccggcttgccagt
ctcagtgtgcagataattctgctgatccagaatgaagacggctcgttggtacccattaca
gaatatcagccttacctgcaacaatgccagacgcccatgagagaaaatgctccctatgaa
gcgataaactggcgtgcagataaacgctttaataaaaatgatattggcaggctgaagcaa
tccttggtgaaactcagccatgcagactgggttgaacactttcgtgaagttgaaagcaac
tggccatttaattttgtcgctcaggatgtgtggcaaagaacttcacagctacactgttgt
gtaccggttatcttggatcagcactttacctactcagtgccctcgattggcacacttaaa
ctggatcccgtgttgggattaaaagtagagaaatgtaggagtagtcacaatcactctaag
aggtaa

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