Providencia vermicola: G3341_01025
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Entry
G3341_01025 CDS
T06449
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pvc
Providencia vermicola
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvc03400
]
G3341_01025 (phrB)
Enzymes [BR:
pvc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
G3341_01025 (phrB)
DNA repair and recombination proteins [BR:
pvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
G3341_01025 (phrB)
Prokaryotic type
G3341_01025 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF1815
Motif
Other DBs
NCBI-ProteinID:
QIC14372
LinkDB
All DBs
Position
complement(238788..240260)
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AA seq
490 aa
AA seq
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MVKKQACHLVWFRHDLRVTDNKALSSACADPEAKVLALFTATPEQWRAHDLSSRQITFLH
QNLLALRDSLAKLGIPLICQTVADFSSAAHWVVEFAQQQQADHLYFNRQYELNERKRDEW
LLKQTLPFHVHTFDDALLLAPQSVTNQKGEMYQVYTPFRRAFISQLITADFRSLAAPKPR
DNALKIQTLSQPLFEHHAVDIAPPFPAGEAAALQQLRQFCRTKVQHYQQQRDIPAIDGTS
QLSPYLAIGVLSPRQCLNRLLAENPHVFDSPDSGAFTWLNELIWREFYHHLLVAFPRLCR
HQPFIEWTTYIQWNTNNTDLNAWQNGQTGYPIVDAAMRQLNATGWMHNRLRMITASFLVK
DLLIDWRLGERYFMQQLIDGTLAANNGGWQWSASTGTDAQPWFRIFNPTTQGKKFDPQGE
FIRQWLPELSSVPDKYIHTPHEWAEANNLTLDYPAPIVDHKQARLATLAAFEAGKNDSIK
TINDQSNNLS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagaaacaggcttgtcatttggtctggtttcgtcatgatctgagagtcaccgat
aataaagccctgtcttctgcttgtgctgatcccgaggctaaagtgctcgccttgtttact
gcaacaccggaacaatggcgggcacatgacctttcttcccgacaaatcacgttcttacac
caaaatctgcttgcgctacgcgactcactggcgaagctaggcatccccttgatttgtcag
acagtcgctgatttttcaagtgcagcacactgggtcgtcgagtttgcacaacagcaacag
gccgatcacctctatttcaaccgtcaatatgaattgaacgaacgtaagcgcgatgaatgg
ttgttaaaacaaacattaccttttcatgtccacacgttcgatgacgcactcttattagcg
cctcaatcagtcaccaatcaaaaaggtgaaatgtatcaggtatacacaccttttcgccga
gcctttattagtcagttgataacggcggattttcgctctttggcagcccctaagccaaga
gataacgcactgaagatccagacgctatcacaacccctgtttgagcatcacgcggtggat
attgcgcccccttttccggctggagaagctgctgcattgcagcaactacggcaattttgc
cgtactaaggtccaacactatcagcaacagcgtgatattcctgctattgatggaaccagc
caattatcgccttacttagcgataggtgttctctcaccacgacaatgtttaaatcgattg
cttgctgaaaacccgcatgttttcgattcacctgatagtggtgcatttacatggctcaat
gaactgatatggcgtgaattttatcatcatttattggtcgcattcccccgcttgtgccgc
caccagccttttattgagtggacaacatatattcagtggaacacgaacaatacggaccta
aatgcatggcaaaatggacaaacaggctatcctatcgtcgatgccgcaatgcgtcagctt
aacgccaccggttggatgcataatcgcctaagaatgatcactgctagctttttagtgaaa
gatttgctcatagactggcgccttggtgagcgatactttatgcaacaactgattgatggc
acgcttgccgccaataatggtggttggcaatggtcagcgtccacggggacagatgcgcaa
ccatggttccgtatctttaatccgacaacacaaggaaagaaatttgaccctcagggtgaa
tttattcgccagtggttacccgaattaagttcagtaccggacaaatatattcatactcct
catgagtgggctgaggcgaataacctaaccttagactatcctgcccccattgttgatcac
aaacaggctcgtttagccactctagcggctttcgaggcaggaaaaaatgacagtataaaa
accattaatgatcaaagtaataatttaagttaa
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