Providencia vermicola: G3341_01465
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Entry
G3341_01465 CDS
T06449
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pvc
Providencia vermicola
Pathway
pvc03030
DNA replication
pvc03410
Base excision repair
pvc03420
Nucleotide excision repair
pvc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3341_01465 (polA)
03410 Base excision repair
G3341_01465 (polA)
03420 Nucleotide excision repair
G3341_01465 (polA)
03440 Homologous recombination
G3341_01465 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvc03032
]
G3341_01465 (polA)
03400 DNA repair and recombination proteins [BR:
pvc03400
]
G3341_01465 (polA)
Enzymes [BR:
pvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G3341_01465 (polA)
DNA replication proteins [BR:
pvc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G3341_01465 (polA)
DNA repair and recombination proteins [BR:
pvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G3341_01465 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G3341_01465 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Prok-E2_E
DUF2529
HHH
Motif
Other DBs
NCBI-ProteinID:
QIC14455
LinkDB
All DBs
Position
340409..343198
Genome browser
AA seq
929 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPSHVAV
VFDAKGKTFRDELFESYKSHRPPMPDDLREQIAPLHEMVEAMGLPLLVVSGVEADDVIGT
LARQASQKGIPVLISTGDKDMAQLVEPNITLINTMTNTILGPQEVVDKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTALALLQGIGSLEKIYDSLDEIAALGFRGSKTLAPKMEENR
EVAFLSYQLATIKTDVELDKSCEELAITKPNAEKLHQLFSRYEFKRWLADVENGTWMEGK
SAKSSAAASKTEKKIEAVMSAPTLSAENYQTILEKADLDRWVEKLASASLFAFDTETDSL
DTQEAHLVGMSFAIEPGYAAYLPLGHDYLDAPAQLPLNDVLAVLKPILESEKILKVGQNL
KYDAEVLLNYDIELKGIEFDTMLESYVLNSVAGMGRHDMDSLAERHLNHKTVSFEEIAGK
GKKQLTFNQIALEQAANYAAEDADVTLLLHQALYPQLEAEPKLNKVFREIEMPLVPVLVR
MERKGVLIDAAVLAAQSKEITARLAELEKEAFELAGEEFNLASPKQLQAILFEKLQLPVV
KKTPSGAPSTNEEVLEELALNHALPKLLLEHRSLAKLKSTYTDKLPLMISPQTQRVHTSY
HQAVTATGRLSSRDPNLQNIPVRTEEGRRIRQAFIARQGYKVVAADYSQIELRIMAHLSQ
DKGLLTAFAEGKDIHRATASEVFGVPLDEVTSDQRRSAKAINFGLIYGMSAFGLARQLGI
PRGEAQRYMDLYFERYPGVLRYMENTRHQASEQGYVETLEGRRLYLADIKSSNGMRRKAA
EREAINAPMQGTAADIIKKAMIAVDAWLQTEKPHADMLMQVHDELVFEVKESELDSVTAK
IRELMEQSMQLDVPLKVDVGIGDNWDEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatagcagaaaatcctcttatattggtagatggctcatcttacctataccgc
gcttatcatgcatttccacctctgactaacagtgcaggcgaaccgacaggtgccatgtat
ggtgtgctcaatatgttgcgtagcttgattatgcaatatcagccaagccatgtggctgtc
gtctttgatgccaagggaaaaacatttcgtgatgaactgtttgaaagttataaatcacac
cgtcctcccatgccggatgatttgcgtgagcaaatagcaccactgcacgaaatggtagaa
gcaatgggtttaccattattggtggtttctggggtagaagctgatgacgtgattggtact
cttgcaagacaagcgagtcaaaaagggatccctgtcttgatcagtactggtgataaagat
atggcgcagttggttgaacccaatattacgctgatcaataccatgaccaatacgatatta
gggccacaggaagtggttgataaatatggtgtaccacctgaattgattatcgactttttg
gctttaatgggggattcctctgataacattccgggggttccgggggttggcgaaaaaaca
gcgcttgccttattacaggggatcggcagtttagagaagatttatgattctttagatgag
attgcggcgcttggatttagaggctcaaaaacacttgcccctaaaatggaagaaaatcga
gaagttgcattcctctcttatcaacttgcaaccattaaaacggatgttgagttagacaaa
agctgtgaagagcttgccattaccaaaccaaatgcagaaaaacttcatcaattgtttagc
cgctatgaatttaaacgttggttagccgatgtcgaaaatggcacttggatggaggggaaa
agcgcgaagagtagtgcagcagcaagtaaaacagaaaagaaaattgaagctgtcatgtct
gctccgacactgagtgcggaaaattaccaaacgatcttagaaaaagcagatttagatcgt
tgggtagaaaaattagcgtcagcatctctatttgcttttgatactgaaaccgacagttta
gatactcaagaagctcacttagtcggcatgtcctttgcgattgaacctggttatgcggct
tatctacccttaggtcatgattatctcgatgcaccagctcaactgccattaaatgatgtt
ttggctgtattaaagccgatactggaaagtgaaaaaatcttgaaagtagggcaaaactta
aaatatgacgctgaggtgttactcaattacgatattgagcttaaaggtattgaattcgac
acgatgttggagtcgtatgtactcaacagcgttgcgggcatggggcgccatgatatggat
agcctcgcggaacgccatcttaaccataaaaccgtctctttcgaagaaatcgctggaaag
ggcaaaaagcaactgacattcaatcaaattgcgttggaacaagcggcgaattacgcagca
gaagatgccgatgtgactttgctactccatcaagctctgtatccacagctagaagctgag
cctaagttgaataaagttttccgtgaaatcgaaatgcctttagtgcctgttcttgtcaga
atggagcgtaaaggggtattaatcgatgcggcggtgctagcggctcaatcgaaagagatc
actgcacgtttggcggaattggagaaagaggcttttgagcttgcgggtgaagagttcaat
cttgcgtcaccaaaacaactacaagcgattctctttgagaaactgcaattgcctgttgtg
aagaaaacgccaagcggtgcaccttccaccaatgaagaagtccttgaagagttagcactg
aatcacgcattgcctaagttgttacttgaacatcggagtcttgcaaaactgaagtcaacc
tatacagataagttgccgttgatgatcagcccgcaaactcaacgggtacacacctcgtat
caccaagcagtgacagcgacagggcgtttatcgtctcgtgaccctaacttgcaaaatatc
cctgttagaacggaagaaggccgtcgtattcgacaggctttcattgcacgtcagggctat
aaggttgtggcggcggactattcgcaaatcgaattacggattatggctcacttatcacaa
gataaggggttgttaactgcatttgcggaaggtaaggatattcaccgtgcaacggcatct
gaagtatttggtgtgcctttggatgaagtgacgagtgatcagcgtcgtagcgcaaaagca
attaactttggtttgatttatggcatgagcgcatttggattagcgcgccaattggggatc
cctcgtggtgaagcgcaacgctatatggacctctattttgagcgttacccaggcgtgttg
cgttatatggaaaatacacgccatcaagcctctgaacaaggctatgttgaaactctagaa
ggacgtcgtctgtatcttgcggatattaaatcaagcaatggtatgcgccgaaaagcggct
gaacgtgaggcgatcaacgcacctatgcaaggaacggcagccgatatcatcaagaaagcg
atgatcgcggtggatgcttggttacagaccgaaaaaccacatgctgacatgctcatgcaa
gtacatgatgaattggtttttgaagtcaaagagtcagagcttgatagtgtgaccgccaaa
atacgtgagttgatggaacaaagtatgcaacttgatgtaccgttgaaggttgatgtcggt
attggcgataactgggatgaagcccactag
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