KEGG   Providencia vermicola: G3341_03355
Entry
G3341_03355       CDS       T06449                                 
Name
(GenBank) exonuclease subunit SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pvc  Providencia vermicola
Brite
KEGG Orthology (KO) [BR:pvc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvc03400]
    G3341_03355
DNA repair and recombination proteins [BR:pvc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     G3341_03355
    Archaeal homologous recombinant proteins
     G3341_03355
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 AAA_21 cobW ABC_tran NTPase_1 AAA_22
Other DBs
NCBI-ProteinID: QIC14799
LinkDB
Position
complement(783502..787179)
AA seq 1225 aa
MKILSLRLKNINSLKGEWKIDFTQEPFASQGLFAITGPTGAGKTTLLDAICLALYHQTPR
LSTLSASQNELMTRHTGDCLAEVEFEVKGIAYRAFWSQRRAGNKPEGKLQSPKAELATSD
DGKIIAEKISEVREKIIQVTGLDFERFTKSILLSQGDFAAFLNASEKERADLLEEITGTE
IYSQVSSYIYRQHKQVKHDLELLKTRAQSIHLLTESEHQAFVAQQTHLASQESQLNDTRA
QYQQALYWQQRRQQLAARLSQLQYEKQQAEQAYNDAQPKLKKLANNLPAESMRPLWLDLE
RQQQSLNELTEKQRQLLQHIEHQHQQLTPLQMQLTQAQDKDKQHQAYVQQQTLLIDSQVR
PLDNEIAHLHQQIREVSEQQSQDQAEYRSKQALISDAQQQAKLANTEQQHIQHYLEQNAQ
DARILQQIGLWRQQGHSIDELNQRVLALKQKHQALTQEQLTLSAEQQQQVEQNTQTQQQL
EQETMTYQAVEAHYLAWQNKHDVEQLNHAIEQLRTRLQHAQLLPLLLSQWQEQQKQLKQK
QSQQDEITQSISQAEQQIQLTETQINHLQPHLADLTARLRLEQKIVSLEKERQQLLSGEP
CPLCGSTEHPSIEQYQAIAPTQTEQRLAELTKQLEELKQTQMAQHSLKQQEIQRQAENQR
SQQQLIAQEGNLHQQWVTACQQALAPQLEMTDVVVEQFIAELQQQLAIQQQLLQDFTVLE
RKYQQLKYQLHEKQSLNKQQQSTLALVIERIKHLHQLIDETQTELNIQQQRQHEQKQQLH
IALADFDLPINESFDNRFAVLEQRGQRYEQQRQAAQEIAKKIAVNAATLQAQMAQQADLN
KRLESTCQQLQQLKLTLQQKQAMRQQLLDGQPITAFVAQLQAQQDKLTQHKQQLTEQISH
CEKAIASLKGSQTEIEGAITKNQPLLANAQQAFDTALSMSPFATQQEFLGALLSSDEKLQ
LEQLQQKLEQSRLQAQTRYTEGELTLSEHLNQKPETFTEASPEKWQQEIAKLDEEIKNLN
KQQGQIFSQLEADRQQRHQQRGLLQEIADSQSRYDDWGYLTELIGSADGDKFRRYAQGLT
FDCLISLANLRLDKLHGRYLLKRNHNADLELQVIDGWQADTVRDIKTLSGGESFLVSLAL
ALALSDMVSSKTQLESLFLDEGFGTLDPETLDIALDALESLNASGKTIGVISHVEAMKER
IPVQITVKKTNGFGFSELPSQFRVN
NT seq 3678 nt   +upstreamnt  +downstreamnt
atgaaaatcttgagcttacgtttaaaaaatattaactcccttaaaggcgaatggaaaata
gactttacccaagaaccgtttgctagtcagggactgtttgcgattactggcccaacaggg
gcaggcaaaacaacattgctggatgctatttgtttggcgctctaccatcaaacgcctcgc
ttgagcactttatctgccagccaaaacgaactcatgacacgtcatactggtgactgcttg
gctgaggttgaatttgaagtaaaaggtattgcttatcgcgcattttggagtcaacgccga
gcgggtaataaacctgaaggtaagctgcaatctccaaaagcggagttagcaactagcgat
gacggtaaaattattgctgagaaaatcagtgaggtaagagaaaaaatcattcaggtgaca
ggactcgattttgaacgttttaccaaatcgatcttattatcacagggtgattttgccgcc
ttcttaaatgctagcgaaaaagaacgcgctgacttattagaagagatcacaggaaccgag
atttatagccaagtatccagctatatctaccgtcagcataagcaagttaaacatgattta
gagctgttaaaaactcgcgcgcaaagcattcatttacttaccgagagtgaacatcaagca
ttcgtcgcccagcaaacgcatttggctagccaagaaagccagctaaatgatacacgcgcc
caatatcaacaggccttatattggcagcaacgtcggcaacaattggcagcgcgtttgagc
caattacaatatgaaaaacaacaagcagaacaagcctacaacgatgcacagcctaaacta
aaaaaactggcaaacaacttaccagcagagagtatgcgaccgctatggctagatttagag
cgccaacaacaatccctgaatgaactcactgaaaaacagcgccagcttttacagcatatc
gaacatcaacaccaacaactcaccccgttgcaaatgcagctcacgcaggcacaagataaa
gacaagcaacatcaagcttacgtgcagcaacaaaccttgttgatcgatagtcaagttcgc
cctctggacaatgagatcgctcatttacatcagcagattagggaagtttcagagcaacaa
tcacaagatcaagctgaatatcgttcaaaacaggccttaatttccgatgcccaacagcag
gctaaactggcaaatacagaacaacaacacattcagcattacctagaacaaaatgcacaa
gatgcccgcattctgcaacaaattggattatggcgccaacaaggccactctattgatgag
ttaaatcaacgcgtactggcattaaaacaaaaacatcaagctttaacgcaagagcagtta
accttgtccgccgagcaacagcagcaagttgagcaaaatacgcaaactcaacaacagctc
gaacaagagacgatgacctatcaagcagttgaagcacactatttagcgtggcagaacaaa
cacgatgttgagcagcttaatcacgcaatagaacagctgcgaacaagattgcaacatgcc
caactattgcctttattattatcgcaatggcaggaacaacagaaacaattaaagcaaaaa
caaagccaacaagatgaaattactcagtctatctctcaagctgaacaacaaattcaactc
actgaaacacaaattaatcatcttcagccacatttagcagacttgactgcacggttacgc
ttagaacaaaaaatcgtcagtttggaaaaggaacggcagcaattactctcgggcgagcct
tgtcctttgtgcgggtcgactgagcatccttcgattgaacagtatcaagccattgcgccg
acgcaaacggaacagcgattagctgagctaaccaagcaattggaagagttaaagcaaacg
cagatggcccagcattcactgaaacaacaagaaatccagcgtcaagctgagaaccaaaga
tcacaacaacaattaattgcccaagaaggcaacttacaccagcaatgggtaaccgcttgc
caacaagccttagcgcctcaattagagatgacagatgttgttgttgaacaattcattgct
gagcttcagcaacaactcgccatacaacaacaattgttgcaggatttcactgtccttgaa
cgcaaatatcaacaactaaaatatcaattacatgaaaaacagtctttaaataaacaacag
caatcgacacttgccttggttatcgaacgtattaagcacttacatcaacttatcgatgaa
acacaaaccgagctgaacatacagcagcaacgtcaacatgagcaaaagcagcaattacac
attgcactggctgactttgatctgcccatcaacgaaagttttgataaccgttttgctgta
ttagaacagcgaggccaacggtatgaacaacaaaggcaagcagctcaagagatagcaaag
aaaattgccgtcaatgcagcaaccttacaagcgcaaatggcacagcaggctgacttaaat
aaacgactagagagcacctgccagcagctacaacaattaaaattaacgctacaacaaaag
caagctatgcgccaacaattattagatgggcagcccattacagcgtttgtcgcccaactt
caggcacagcaagacaaactgactcaacataagcaacagctcacagagcaaatcagccac
tgtgaaaaagcgattgcatcgctcaaaggtagccaaactgaaattgaaggcgcaatcact
aaaaatcagcctctattagccaacgctcaacaggctttcgatactgcgctctccatgagt
ccattcgcgacacaacaagaattcttaggcgccttattatcttctgatgaaaaacttcaa
cttgaacagttacaacagaagctagagcagtcacgactacaggcgcaaacacgctataca
gaaggtgaactaacgttatcagaacatttaaatcagaaacctgaaacatttaccgaggcc
agcccagaaaaatggcaacaagagatagccaaacttgatgaagagatcaaaaacctcaat
aaacaacaagggcaaattttcagtcagcttgaggctgatagacaacaacgtcatcaacaa
cgaggtttgctgcaagaaattgcagacagccaatctcgctacgatgattggggctatcta
accgaacttattggttccgctgacggtgataagttccgtcgttacgctcaagggctcacc
ttcgactgtctcatttcactggctaatttacgactcgataaactgcatggccgctatttg
ctaaagcgcaatcataatgctgatcttgagttacaagtcattgatggttggcaagctgat
actgtgagagatattaaaacgctttcaggtggggaaagcttccttgttagcctagcgctc
gcactcgcgctctctgatatggtgagtagcaaaacacaactcgaatcgctatttctggat
gaaggctttggtactctcgatccagaaacgttggatattgcgttagatgcattagaaagt
ctcaatgcctctggaaaaacgattggggtgatcagccatgtcgaagcgatgaaagagcgg
atcccagttcaaatcaccgtgaagaaaaccaatgggtttggctttagtgaattaccgagt
caatttagagttaactga

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