Providencia vermicola: G3341_03355
Help
Entry
G3341_03355 CDS
T06449
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pvc
Providencia vermicola
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvc03400
]
G3341_03355
DNA repair and recombination proteins [BR:
pvc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G3341_03355
Archaeal homologous recombinant proteins
G3341_03355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
cobW
ABC_tran
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIC14799
LinkDB
All DBs
Position
complement(783502..787179)
Genome browser
AA seq
1225 aa
AA seq
DB search
MKILSLRLKNINSLKGEWKIDFTQEPFASQGLFAITGPTGAGKTTLLDAICLALYHQTPR
LSTLSASQNELMTRHTGDCLAEVEFEVKGIAYRAFWSQRRAGNKPEGKLQSPKAELATSD
DGKIIAEKISEVREKIIQVTGLDFERFTKSILLSQGDFAAFLNASEKERADLLEEITGTE
IYSQVSSYIYRQHKQVKHDLELLKTRAQSIHLLTESEHQAFVAQQTHLASQESQLNDTRA
QYQQALYWQQRRQQLAARLSQLQYEKQQAEQAYNDAQPKLKKLANNLPAESMRPLWLDLE
RQQQSLNELTEKQRQLLQHIEHQHQQLTPLQMQLTQAQDKDKQHQAYVQQQTLLIDSQVR
PLDNEIAHLHQQIREVSEQQSQDQAEYRSKQALISDAQQQAKLANTEQQHIQHYLEQNAQ
DARILQQIGLWRQQGHSIDELNQRVLALKQKHQALTQEQLTLSAEQQQQVEQNTQTQQQL
EQETMTYQAVEAHYLAWQNKHDVEQLNHAIEQLRTRLQHAQLLPLLLSQWQEQQKQLKQK
QSQQDEITQSISQAEQQIQLTETQINHLQPHLADLTARLRLEQKIVSLEKERQQLLSGEP
CPLCGSTEHPSIEQYQAIAPTQTEQRLAELTKQLEELKQTQMAQHSLKQQEIQRQAENQR
SQQQLIAQEGNLHQQWVTACQQALAPQLEMTDVVVEQFIAELQQQLAIQQQLLQDFTVLE
RKYQQLKYQLHEKQSLNKQQQSTLALVIERIKHLHQLIDETQTELNIQQQRQHEQKQQLH
IALADFDLPINESFDNRFAVLEQRGQRYEQQRQAAQEIAKKIAVNAATLQAQMAQQADLN
KRLESTCQQLQQLKLTLQQKQAMRQQLLDGQPITAFVAQLQAQQDKLTQHKQQLTEQISH
CEKAIASLKGSQTEIEGAITKNQPLLANAQQAFDTALSMSPFATQQEFLGALLSSDEKLQ
LEQLQQKLEQSRLQAQTRYTEGELTLSEHLNQKPETFTEASPEKWQQEIAKLDEEIKNLN
KQQGQIFSQLEADRQQRHQQRGLLQEIADSQSRYDDWGYLTELIGSADGDKFRRYAQGLT
FDCLISLANLRLDKLHGRYLLKRNHNADLELQVIDGWQADTVRDIKTLSGGESFLVSLAL
ALALSDMVSSKTQLESLFLDEGFGTLDPETLDIALDALESLNASGKTIGVISHVEAMKER
IPVQITVKKTNGFGFSELPSQFRVN
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttgagcttacgtttaaaaaatattaactcccttaaaggcgaatggaaaata
gactttacccaagaaccgtttgctagtcagggactgtttgcgattactggcccaacaggg
gcaggcaaaacaacattgctggatgctatttgtttggcgctctaccatcaaacgcctcgc
ttgagcactttatctgccagccaaaacgaactcatgacacgtcatactggtgactgcttg
gctgaggttgaatttgaagtaaaaggtattgcttatcgcgcattttggagtcaacgccga
gcgggtaataaacctgaaggtaagctgcaatctccaaaagcggagttagcaactagcgat
gacggtaaaattattgctgagaaaatcagtgaggtaagagaaaaaatcattcaggtgaca
ggactcgattttgaacgttttaccaaatcgatcttattatcacagggtgattttgccgcc
ttcttaaatgctagcgaaaaagaacgcgctgacttattagaagagatcacaggaaccgag
atttatagccaagtatccagctatatctaccgtcagcataagcaagttaaacatgattta
gagctgttaaaaactcgcgcgcaaagcattcatttacttaccgagagtgaacatcaagca
ttcgtcgcccagcaaacgcatttggctagccaagaaagccagctaaatgatacacgcgcc
caatatcaacaggccttatattggcagcaacgtcggcaacaattggcagcgcgtttgagc
caattacaatatgaaaaacaacaagcagaacaagcctacaacgatgcacagcctaaacta
aaaaaactggcaaacaacttaccagcagagagtatgcgaccgctatggctagatttagag
cgccaacaacaatccctgaatgaactcactgaaaaacagcgccagcttttacagcatatc
gaacatcaacaccaacaactcaccccgttgcaaatgcagctcacgcaggcacaagataaa
gacaagcaacatcaagcttacgtgcagcaacaaaccttgttgatcgatagtcaagttcgc
cctctggacaatgagatcgctcatttacatcagcagattagggaagtttcagagcaacaa
tcacaagatcaagctgaatatcgttcaaaacaggccttaatttccgatgcccaacagcag
gctaaactggcaaatacagaacaacaacacattcagcattacctagaacaaaatgcacaa
gatgcccgcattctgcaacaaattggattatggcgccaacaaggccactctattgatgag
ttaaatcaacgcgtactggcattaaaacaaaaacatcaagctttaacgcaagagcagtta
accttgtccgccgagcaacagcagcaagttgagcaaaatacgcaaactcaacaacagctc
gaacaagagacgatgacctatcaagcagttgaagcacactatttagcgtggcagaacaaa
cacgatgttgagcagcttaatcacgcaatagaacagctgcgaacaagattgcaacatgcc
caactattgcctttattattatcgcaatggcaggaacaacagaaacaattaaagcaaaaa
caaagccaacaagatgaaattactcagtctatctctcaagctgaacaacaaattcaactc
actgaaacacaaattaatcatcttcagccacatttagcagacttgactgcacggttacgc
ttagaacaaaaaatcgtcagtttggaaaaggaacggcagcaattactctcgggcgagcct
tgtcctttgtgcgggtcgactgagcatccttcgattgaacagtatcaagccattgcgccg
acgcaaacggaacagcgattagctgagctaaccaagcaattggaagagttaaagcaaacg
cagatggcccagcattcactgaaacaacaagaaatccagcgtcaagctgagaaccaaaga
tcacaacaacaattaattgcccaagaaggcaacttacaccagcaatgggtaaccgcttgc
caacaagccttagcgcctcaattagagatgacagatgttgttgttgaacaattcattgct
gagcttcagcaacaactcgccatacaacaacaattgttgcaggatttcactgtccttgaa
cgcaaatatcaacaactaaaatatcaattacatgaaaaacagtctttaaataaacaacag
caatcgacacttgccttggttatcgaacgtattaagcacttacatcaacttatcgatgaa
acacaaaccgagctgaacatacagcagcaacgtcaacatgagcaaaagcagcaattacac
attgcactggctgactttgatctgcccatcaacgaaagttttgataaccgttttgctgta
ttagaacagcgaggccaacggtatgaacaacaaaggcaagcagctcaagagatagcaaag
aaaattgccgtcaatgcagcaaccttacaagcgcaaatggcacagcaggctgacttaaat
aaacgactagagagcacctgccagcagctacaacaattaaaattaacgctacaacaaaag
caagctatgcgccaacaattattagatgggcagcccattacagcgtttgtcgcccaactt
caggcacagcaagacaaactgactcaacataagcaacagctcacagagcaaatcagccac
tgtgaaaaagcgattgcatcgctcaaaggtagccaaactgaaattgaaggcgcaatcact
aaaaatcagcctctattagccaacgctcaacaggctttcgatactgcgctctccatgagt
ccattcgcgacacaacaagaattcttaggcgccttattatcttctgatgaaaaacttcaa
cttgaacagttacaacagaagctagagcagtcacgactacaggcgcaaacacgctataca
gaaggtgaactaacgttatcagaacatttaaatcagaaacctgaaacatttaccgaggcc
agcccagaaaaatggcaacaagagatagccaaacttgatgaagagatcaaaaacctcaat
aaacaacaagggcaaattttcagtcagcttgaggctgatagacaacaacgtcatcaacaa
cgaggtttgctgcaagaaattgcagacagccaatctcgctacgatgattggggctatcta
accgaacttattggttccgctgacggtgataagttccgtcgttacgctcaagggctcacc
ttcgactgtctcatttcactggctaatttacgactcgataaactgcatggccgctatttg
ctaaagcgcaatcataatgctgatcttgagttacaagtcattgatggttggcaagctgat
actgtgagagatattaaaacgctttcaggtggggaaagcttccttgttagcctagcgctc
gcactcgcgctctctgatatggtgagtagcaaaacacaactcgaatcgctatttctggat
gaaggctttggtactctcgatccagaaacgttggatattgcgttagatgcattagaaagt
ctcaatgcctctggaaaaacgattggggtgatcagccatgtcgaagcgatgaaagagcgg
atcccagttcaaatcaccgtgaagaaaaccaatgggtttggctttagtgaattaccgagt
caatttagagttaactga
DBGET
integrated database retrieval system