Providencia vermicola: G3341_03565
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Entry
G3341_03565 CDS
T06449
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
pvc
Providencia vermicola
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvc03032
]
G3341_03565 (hupB)
03036 Chromosome and associated proteins [BR:
pvc03036
]
G3341_03565 (hupB)
03400 DNA repair and recombination proteins [BR:
pvc03400
]
G3341_03565 (hupB)
DNA replication proteins [BR:
pvc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
G3341_03565 (hupB)
Chromosome and associated proteins [BR:
pvc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
G3341_03565 (hupB)
DNA repair and recombination proteins [BR:
pvc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
G3341_03565 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Peptidase_M35
MarR
Motif
Other DBs
NCBI-ProteinID:
QIC14841
LinkDB
All DBs
Position
835302..835592
Genome browser
AA seq
96 aa
AA seq
DB search
MGMIRVNKSQLIDQIASEANISKAAAGRVVDAFVASVTSSLSKGDDVALVGFGTFTVRER
AARTGRNPQTGKEIKIAAAKVPAFRPGKGLKDAVNS
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggggatgataagagtgaataagtctcaactgattgatcaaatcgcttctgaagcgaat
atttctaaagctgcagctggccgtgttgttgatgcgtttgttgcatcagtcactagttca
ctgagcaaaggtgatgatgttgctttagttggctttggtacattcaccgttcgtgaacgt
gccgctcgcacaggacgtaacccacaaacaggtaaagagattaagatcgctgcggcgaaa
gtacctgctttccgtccgggtaaaggtttaaaagacgcagttaatagctaa
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