Providencia vermicola: G3341_04225
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Entry
G3341_04225 CDS
T06449
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pvc
Providencia vermicola
Pathway
pvc00300
Lysine biosynthesis
pvc00470
D-Amino acid metabolism
pvc01100
Metabolic pathways
pvc01110
Biosynthesis of secondary metabolites
pvc01120
Microbial metabolism in diverse environments
pvc01230
Biosynthesis of amino acids
Module
pvc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
pvc_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G3341_04225 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G3341_04225 (lysA)
Enzymes [BR:
pvc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
G3341_04225 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QIC14960
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Position
992681..993940
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AA seq
419 aa
AA seq
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MTSFASTTSSYLTPENLISLPEQFGTPVWVYDSSVIIERINQLKIFDTVRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALVAGFQAGRENAEIVFTADVLDRATLARVTELDIPVN
AGSIDMLSQIGERKAGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWHQDLPEALAQIRR
YNLSLVGLHMHIGSGVDYQHLANVCDAMVEQVVSSGVDIQAISAGGGLSTPYREEDELID
VQHYFSLWNRARQRIEQHLGHTVELEIEPGRYLVAESGVLLAEVRAVKHMGSRYYVLVDS
GFNDLMRPAMYGSYHHISVLPADGRSLDNAPQKEAIIAGPLCESGDVFTQQEGGMVETRL
LPEVQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLLVNGKPKLIRRRQTIEELLALEL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacctcatttgcaagcaccacaagctcatatttaacacctgaaaatttaatctcctta
cctgagcaattcggtacacctgtatgggtatacgatagttcagtgattattgaacgtatc
aatcaattgaaaatctttgataccgtgcgtttcgctcaaaaggcatgttcaaacatccat
attctacgactaatgcgtgagcagggcgttaaagttgattctgtttcactgggtgaaata
gagcgtgcgcttgtggcgggttttcaagcgggtcgtgaaaatgcagaaattgtgtttacg
gctgatgtgctcgatagagcgacgttggctcgagtgactgagctggatattccggtcaat
gctggctctattgatatgttaagccaaattggtgagagaaaagcgggtcatccagtttgg
ttacgtattaatccaggtttcggtcatggtcactcacaaaaaaccaatacaggtggtgaa
aatagtaaacatggtatttggcatcaagatctgcctgaagctcttgcccaaattcgtcgt
tataacctgtcgttagttggtttacatatgcatattggctcaggggttgactatcaacat
ttagcgaatgtctgtgatgcaatggttgagcaagtcgtgtcatcgggtgtggatattcag
gctatttcagcgggtggtggattatcaacgccatatcgggaagaagatgagttgatcgat
gtccagcattatttcagcttatggaatcgtgctcgccaacgtattgagcagcatttaggc
cataccgttgagttggaaatagaaccggggcgttatttagtggcagagtctggtgtgtta
ctcgcagaggttagggcagttaaacacatggggagccgctattatgtgttagtggatagt
ggttttaatgatttaatgcgtccagccatgtatggaagctatcatcatatttcagtcctg
cctgcggatgggcgttcgctggataatgcaccacaaaaagaagcgattatcgctgggcct
ttgtgtgagtcaggtgatgtatttactcaacaagaaggcggcatggtggaaacgcgttta
ttaccagaagtgcaagttggtgattatttagtgtttcatgacaccggtgcatacggtgct
tcaatgtcttctaactacaacagtcgcccattattacccgaagtgctactcgttaatggt
aaaccaaaacttattcgtcgccgtcaaaccatcgaagagttattggcgttagagctttaa
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