Providencia vermicola: G3341_04630
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Entry
G3341_04630 CDS
T06449
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pvc
Providencia vermicola
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvc03016
]
G3341_04630 (truD)
Enzymes [BR:
pvc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
G3341_04630 (truD)
Transfer RNA biogenesis [BR:
pvc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G3341_04630 (truD)
Prokaryotic type
G3341_04630 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QIC15027
LinkDB
All DBs
Position
1082463..1083512
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AA seq
349 aa
AA seq
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MKIMNVQYLHGKPLSFGKLKSQPEDFIVKENLGFELDGEGEHVMVRVEKIGYNTLFVAEQ
LAKFAKISARAVSYAGLKDRNAMTEQWFCLQMPGKETPDFSLWQLDGCRVIATTRQKRKL
RIGTLKGNQFELTIREISDPDDVELRLQKIAEQGVPNYFGEQRFGRDGQNLTQALRWANQ
EITVRERNKRSFYLSAARSAMFNHVTSERIANQTVNQVLLGDALQLTGRGSWFVATTEEF
SSLQPRVDTFELSITAPLPGDGELGTQEDALAFETGCLENYRALITLMKTERVSSTRRAM
MMKPQNLQWQWVDQTTLKMCFFLNSGSFATSVVRELINQDSADAENFIE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcatgaatgtacagtacctgcatggtaagccgctatcattcggtaaactaaaa
agtcagcctgaagacttcatcgttaaggaaaacttaggttttgagcttgatggagaaggc
gagcatgttatggttcgtgttgaaaagattggctataacacgctatttgttgccgagcag
ctcgctaagttcgcaaaaatttcagcaagagcagtaagctatgctggcttaaaagatcgc
aatgcgatgacggaacaatggttctgtttgcagatgccaggtaaagaaacacctgatttt
tctttgtggcaacttgatggctgtcgagtgattgcgacaacgagacaaaaaagaaaattg
cgcattggcaccttgaaaggaaaccaatttgaattgaccattcgggagatttctgatcct
gacgatgtcgaattgcgtttacagaaaatagcagagcaaggcgttcctaactattttggt
gaacaacgctttggtcgagatggacagaatttaactcaagcgttacgctgggcaaatcaa
gaaattactgttcgtgagcgcaacaaacgaagcttttatctgtcagctgcacgcagtgcg
atgtttaaccacgtgacgagtgagcgtattgcgaaccagaccgtcaatcaagtgttatta
ggtgatgctcttcaattgacagggcgtggcagttggtttgtggcaacgacagaagaattt
tcttcattacaaccccgagttgatacatttgaacttagcatcacggcacctttgcccggt
gatggtgaattaggtacgcaagaagatgcgctagcctttgagacgggttgcttagagaat
tatcgcgccttgataacattgatgaaaacggaacgggtatcctcaacacgtagggcgatg
atgatgaaacctcaaaaccttcaatggcaatgggttgatcaaacgacattaaaaatgtgt
tttttccttaattcgggaagttttgcaacgagcgtggtgcgagaacttattaatcaggat
agtgccgatgctgaaaattttattgagtaa
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