Providencia vermicola: G3341_04650
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Entry
G3341_04650 CDS
T06449
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pvc
Providencia vermicola
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvc03021
]
G3341_04650 (rpoS)
Transcription machinery [BR:
pvc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G3341_04650 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QIC15031
LinkDB
All DBs
Position
1086354..1087340
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AA seq
328 aa
AA seq
DB search
MSQSSLKANELYNDLDDSMMDDAFDESQFKEEDLVAELDDEMDLFQSTNLRVLDATQIYL
SEIGFSPLLTAEEEVFYARRALRGDIASRQRMIESNLRLVVKISRRYNNRGLALLDLIEE
GNLGLIRAVEKFDPEKGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNIYLRTA
RELAQKLDHEPSAEEIAEQLDKPVEDVSRMLRLNERITSVDTPIAGDSEKSLLEVLSDEN
ESGPEHTIQDNNLKENIVKWLFELNPKQREVLARRFGLLGYEAETLEEVGREIGLTRERV
RQIQVEGLRRLKDILQGEDLSLEALFNM
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagttcgctgaaagctaacgagttatacaatgacctcgacgacagcatgatg
gatgatgcttttgatgagagtcaattcaaagaagaggatctggttgcagaactagacgat
gaaatggacttattccagagcacgaatttacgtgttctggatgcaacccaaatttatctc
agtgaaattggattctctccgctcctgacagctgaagaagaagttttctatgctaggaga
gccttgcgtggtgacattgcttcacgtcaacgcatgatagaaagtaatcttcgcttagtt
gttaagatctctcgacgttataataatcggggcctagcattacttgatctcattgaggaa
ggtaatctagggttaattcgcgcagttgaaaaatttgatcctgaaaaaggtttccgtttt
tcaacatatgcgacgtggtggatacgccagacgattgaacgtgccatcatgaatcaaacc
agaaccatccgcctccctattcatatcgtcaaagagctcaatatttaccttcgaaccgcc
cgagaattagcgcaaaaacttgatcatgagcctagcgctgaagaaatcgccgaacagtta
gataagccagtagaagatgttagccgtatgctacgtttaaatgaacgtattacctcggtt
gatacgcctattgccggtgattctgaaaaatctttacttgaggttctatctgatgagaat
gaatcaggcccagaacatacaattcaagataacaacttaaaagaaaacattgtgaagtgg
ttatttgaattgaatcctaaacagcgtgaagtattagcacgacgttttggtttattgggt
tatgaggcagaaacgctcgaagaggttggtcgagaaattggattaacacgggaaagagta
cgtcagattcaagtggaagggttaagaaggttaaaagatattttacaaggtgaggatctt
tctttggaagccttatttaatatgtaa
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