Providencia vermicola: G3341_05980
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Entry
G3341_05980 CDS
T06449
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pvc
Providencia vermicola
Pathway
pvc00470
D-Amino acid metabolism
pvc00550
Peptidoglycan biosynthesis
pvc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G3341_05980 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
G3341_05980 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pvc01011
]
G3341_05980 (murD)
Enzymes [BR:
pvc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
G3341_05980 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pvc01011
]
Precursor biosynthesis
Amino acid ligase
G3341_05980 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QIC15283
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Position
1398621..1399946
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AA seq
441 aa
AA seq
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MAGMQGKQYQGKKVVIIGLGLTGLSCVHFFLSHGVIPRVMDTRAVPPGVEQLPKEVECHR
GSLNNQWLQEADLIVASPGIALATPELQQAANNGIEIVGDIELFCREVDAPVIAITGSNG
KSTVTSLVGEMAQAAGISVGVGGNIGIPALSLLNQGHQLYVLELSSFQLETTSSLKALAA
TVLNVTEDHMDRYPLGLAQYREAKLRIYHHALNCIVNAQDPLTLPQHTDEEACISFGVDS
GDYYFDTQQRTLVAKNEVLIKVDDMHLTGQHNYTNALAALALADIAGIARHASLSVLKNY
AGLTHRFQLVLLNNGVRWINDSKATNVGSTEAALNGLKVEGTLHLLLGGDGKSADFTPLK
PYLAQDNVRLYCFGRDGKALAQLEPEKSVLTETMEQSMRYLAPNLKSGDMVLLSPACASL
DQFKNFEQRGAIFAQLAKELG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtatgcagggtaaacagtatcagggtaaaaaagtggtcatcattgggctgggg
ttaactggcctatcttgtgtgcactttttcttatcacacggcgttattccgcgagtgatg
gatacccgagctgttcctccgggcgttgaacaattaccgaaagaggtggaatgccatcgc
ggtagtttaaacaaccaatggttgcaagaggctgacttaattgttgccagccccggtatt
gcattagcgacacctgaattacagcaagcggcgaataacggtattgaaattgtcggtgat
atcgaattgttctgccgcgaagttgatgcgcctgttattgcgatcacaggctctaatgga
aaaagcaccgtgacctctttggtgggggaaatggctcaagctgcgggtatctccgttggt
gttggcggaaatatcggtattccagcattgtctttgttaaatcaaggtcaccaactgtat
gtgttagagctatctagttttcaattagagacgacatccagcttaaaagcccttgcagca
acagttttgaatgtcactgaagaccatatggatcgctatccgctaggtctagcacagtac
cgcgaagcgaagttacgtatctatcatcatgcgttgaattgtattgttaatgctcaagat
ccattgacgttaccacagcataccgatgaggaagcatgcattagctttggtgttgatagt
ggcgattattattttgatacacaacagcggacattggtcgcaaaaaatgaagtgctgatc
aaggttgatgacatgcacttaacgggacaacacaattataccaatgcattagcggctctt
gctcttgctgatatcgcgggtatagctcgccatgcaagtttaagtgtgctgaaaaattat
gcaggattaacgcaccgtttccaactggtgttactgaataacggggtgcgttggattaac
gattccaaagcaaccaatgtgggtagcactgaagcggcactgaatggcttaaaagtagaa
ggtacactgcatcttctacttgggggcgatggtaaatcggcagattttacaccattgaag
ccctatcttgctcaggacaatgtgcgcctgtactgctttggtcgtgatggtaaagcacta
gctcagctggaacctgaaaaatccgtgttgactgagacaatggaacagagcatgcgttat
ttagctccgaatctaaaatcaggggatatggttttactctcaccggcatgtgcaagcctc
gatcaatttaagaattttgagcaacgaggtgccatttttgctcagttagcgaaggagcta
ggctga
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