Providencia vermicola: G3341_06975
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Entry
G3341_06975 CDS
T06449
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pvc
Providencia vermicola
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvc03009
]
G3341_06975 (srmB)
Enzymes [BR:
pvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G3341_06975 (srmB)
Ribosome biogenesis [BR:
pvc03009
]
Prokaryotic type
rRNA helicases
G3341_06975 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
AAA_11
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIC15458
LinkDB
All DBs
Position
complement(1582746..1584086)
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AA seq
446 aa
AA seq
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MTATTFSELELDESLINALADKGYERPTAIQAAAIPAAMDGRDVLGSAPTGTGKTAAFLL
PAIQHLLDFPRKKSGPPRVLVLTPTRELAMQVADQAKELCAHNHLDVATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVEILILDEADRMLDMGFANDIETIAGETRW
RKQTMLFSATLEGEAIRDFSERLLEDPVEIDAESSRRERKKIQQFYYRADNLEHKTALLC
HLIAQSDVTKSIVFVRKRERVREVVQWLRDAGIEPCYLEGEMVQAKRNEAVRRLVSGQVK
VLVATDVASRGLDIENVSHVFNFDMPRTADVYLHRIGRTGRAGRKGTAISLIESHDYPLF
GKVTRYIEDPIKMRVVDSLRPSTKAPSASMMNKPKPSKKVLAKRKEKKKEEESKKKAKVR
HRDKKNIGKRRKPVTTASEPSHQKSE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaccacattttctgaacttgaattagatgaaagcctgatcaacgcgctggca
gataaaggctatgaacgccctactgcaattcaggcagccgctatccctgcggcgatggat
ggccgtgacgttttaggttcagccccaactggtacagggaaaaccgcggcattcttgcta
ccagccatccaacatttacttgattttccaagaaaaaaatcaggccctccgcgagttctt
gtattaacgccaactcgcgaactcgcgatgcaggttgcagatcaagcaaaagaattatgt
gcacataatcatcttgatgtcgcgacaatcactggtggtgtcgcctatatgaaccatgct
gaagtctttagcgaaaaccaagatattgttgttgcaacaacaggtcgcttacttcaatac
attaaagaagaaaattttgactgccgtgctgttgaaattctcattcttgatgaagcagac
cgtatgctcgacatgggctttgctaatgatattgaaacaattgcgggggaaacacgctgg
cgtaagcaaacgatgctgttttctgcgactcttgaaggcgaggcgattcgtgacttctcc
gagcgtctgttggaagaccccgttgagatcgacgctgaatcttcccgccgcgaacggaaa
aaaatacagcaattttactatcgtgcagataatttagaacacaaaaccgccttgttatgc
catctcattgcacagagcgatgtgacgaaatcaattgtgtttgttcgcaaacgtgaacgt
gtgcgcgaagttgttcagtggttacgtgatgcgggtattgagccttgctatcttgaagga
gaaatggttcaagcaaaacgtaatgaagcggttcgccgtttagtttcaggccaagtcaaa
gttcttgtggctaccgatgtggcctctcgaggtttagatatcgaaaatgtcagccatgtg
tttaactttgatatgccacggactgctgacgtttatctgcatcgtattggtcgtaccggt
cgtgctggccgaaaaggtaccgcgatttcactgattgaatcacacgattaccctttattc
ggtaaagtgacacgttatattgaagatcctataaaaatgcgtgttgtcgattctttacgt
ccatcaactaaagcaccttctgcatcaatgatgaacaaaccaaaaccatctaagaaagtg
ctcgctaaacgtaaagaaaagaaaaaagaagaagaatcgaagaaaaaagctaaagtccgt
catcgtgataaaaagaacatcggtaaacgccgtaaacccgtgacaacagcttcagaacct
agtcatcaaaaatctgaataa
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