Providencia vermicola: G3341_08250
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Entry
G3341_08250 CDS
T06449
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pvc
Providencia vermicola
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvc03032
]
G3341_08250 (gyrA)
03400 DNA repair and recombination proteins [BR:
pvc03400
]
G3341_08250 (gyrA)
Enzymes [BR:
pvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G3341_08250 (gyrA)
DNA replication proteins [BR:
pvc03032
]
Prokaryotic type
DNA Topoisomerases
G3341_08250 (gyrA)
DNA repair and recombination proteins [BR:
pvc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G3341_08250 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF5748
Motif
Other DBs
NCBI-ProteinID:
QIC15677
LinkDB
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Position
1868388..1870985
Genome browser
AA seq
865 aa
AA seq
DB search
MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARIVGDVIGKYHPHGDIAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMAKIAHEMLADLEKETVDFVPNYDGTEQIPEVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVISGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIIDAYRTGRGKV
YIRARAEVEVDEKNGRETIIVSEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKILNLKDIIAAFVRHRRE
VVTRRTIFELRKARERAHILEALAVALANIDPIIELIRQAPTPAEAKAGLVARPWDLGNV
AAMLERAGDDAARPEWLEEQFGVHDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLEEYRD
LLKQIEALLYILRSPERLMEVIREELEAIREIYNDARRTEITENSADINIEDLISEEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPVREYEEGYYVFMATASGTVKKTPL
QDFSRPRSAGIIAVNLNDGDELIGVDLTNGSNEVMLFSAQGKVVRFAEDAVRPMGRTATG
VRGIRLVDEDKVVSLIIPRGEGHILTVTENGYGKRTAEQEYPTKSRATQGVISIKVSERN
GNVIGAIQVDETDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDEKVVGLQRVA
ETEEDETSDEDSIENSADADTDSAE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacattgccagagaaatcacaccggtcaatatcgaagaagaactaaaaagttcg
tatttggattatgcgatgtccgttattgtcggccgcgcacttccagatgttcgagatgga
ctgaagccagtacaccgcagagtactgtttgcgatgaatgtattgggaaatgattggaat
aaaccctataaaaaatctgcccgtatagtcggggacgttatcggtaaataccatccacat
ggtgatatcgctgtttatgagacgattgttcgtcttgcgcagcctttctctatgcgttat
atgctggtagatggtcaggggaactttggttcagttgacggagactccgcagctgcaatg
cgttatacggaaatccgtatggcgaaaattgcccatgaaatgttagcggatcttgaaaaa
gaaaccgttgatttcgtcccaaactatgatggtacagagcaaatcccagaagtaatgccg
acaaaaatacctaacctattggttaatggctcgtcgggtattgctgtagggatggcaacc
aatattcctccacacaacttaggggaagtcattagtggttgtcttgcttatatagatgat
gaagatatcagcattgaaggcttaatggagcatattcctgggcctgatttcccgaccgct
gccatcattaatggccgtcgtggaattattgatgcttaccgcactggccgcggcaaagtc
tatatccgtgcccgtgcagaagttgaagtcgatgagaaaaatggtcgtgaaaccattatt
gttagcgaaattccttatcaggtaaataaagcacgtcttatcgagaaaattgctgagctc
gttaaagaaaaacgcgtcgaagggatcagtgcattacgtgatgagtcggataaagacggc
atgcgtattgtgattgaagttaaacgtgatgcggttggtgaggttgtgcttaataatctc
tattcactcacacaacttcaagtctcttttgggatcaacatggttgctttgcatcaaggc
caaccgaagatccttaacttaaaagatattattgccgcgtttgttcgccatcgtcgtgaa
gtggtgacacgccgtactatctttgaattacgcaaagcacgtgaacgcgctcatatcctt
gaagcattagccgtagcattagcgaatattgaccctattatcgaactcattcgtcaggca
ccaacgcctgctgaagcgaaagcaggcttagttgcacgcccttgggatctgggtaatgtt
gctgccatgttagaacgcgctggcgacgacgctgcacgtcctgaatggttagaagagcaa
tttggtgttcatgatggtaaatactacctgacagaacaacaagctcaggctatcttggat
ttgcgtctgcaaaaactgactggccttgagcatgaaaaactgctggaagagtatcgtgat
cttctgaaacaaattgaagcattactgtatattctacgtagtcctgagcgtttaatggag
gtcattcgcgaagaattagaagctattcgcgaaatctataacgatgctcgtcgaacagaa
atcactgaaaactctgctgatatcaatattgaagatttaatcagtgaagaagatgtggtc
gttaccttatctcaccaaggctatgttaagtatcagccattgtctgattacgaagcacaa
cgtcgtggtggtaaaggtaaatctgcggcacgtattaaagaagaagactttattgaacgt
ctgctggtggctaacacccatgatacgattttgtgtttctccagccgtggtcgcctatat
tggatgaaggtttatcaattacctgaagcaagtcgtggggctcgtggtcgtccaatcgtt
aatctgctgccactcgagcaggatgagcgtattacagcgatcttgccagttcgcgaatac
gaagaagggtattatgtcttcatggcaaccgctagcggtacggtgaagaaaacccctctg
caagacttcagccgcccaagaagtgccggtattattgcggttaacctcaatgacggtgat
gagctgattggtgttgatttaaccaatggttcaaatgaagtgatgctgttctcggcgcaa
ggtaaagtcgttcgtttcgctgaagatgctgttcgtccaatggggcgtaccgcaacaggt
gttcgtggtatccgtttagtggatgaagataaagtggtttcattgattattccacgcggt
gaaggtcatattttaacggtgactgaaaatggctatggtaaacgtacggctgagcaagaa
tacccaacgaaatctcgtgccactcaaggtgttatctccattaaagtgagtgaacgtaac
ggtaatgtgatcggggctatccaagtggatgaaaccgaccaaattatgatgattaccgat
gccggaactttagtgcgtacacgcgtctcagaagtgagtgttgtaggccgtaatactcag
ggtgtcactctgattagaacagctgaagatgaaaaagttgttggtttacaacgtgtcgct
gaaacggaagaggatgaaacctctgatgaagatagtatagagaatagtgcggatgctgat
acagattcagccgaataa
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