Providencia vermicola: G3341_10075
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Entry
G3341_10075 CDS
T06449
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pvc
Providencia vermicola
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvc03016
]
G3341_10075
Enzymes [BR:
pvc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
G3341_10075
Transfer RNA biogenesis [BR:
pvc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G3341_10075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
ODP
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
QIC16006
LinkDB
All DBs
Position
complement(2249296..2251239)
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AA seq
647 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGLIKSTDKGFGFLEVDGQKSYFVPPPQMKKVMHGDRV
VAAIHTDKDREFAEPEELVEPFLTRFVGRIQKKDNDNRLFVIPDHPLLKDTISCRPTKDV
THEFAQGDWVVAEMRRHPLKGDKGFYADITEFITDGEDHFAPWWVTLRRHQLDRAEPQMV
DSERDDEGIERIDLTHLHFVTIDSASTEDMDDALYVERTPEGNLKLYIAIADPTSYIKEG
SELDKLALARSYTNYLPGFNIPMLPRELSDNLCSLRPNEQRPALVCATTILADGSIAEDI
QFFSAWVESKSKLVYDEVSDWLEKTGSWQPANPADQQQIELLKEMADKRHQWRQQNALVF
KDRPDYRFLLDDKGNVIDIIVESRRTANRIVEEAMITANLCAAIQLKNSLGFGVFNVHMG
FEPLQIDQVVQTLKDHGIETTADALLTLEGFRQLRRQLDAQPTQFLDSRIRRFQTFAEVK
SEPGPHFGLGFDAYATWTSPIRKYTDIVNHRLLKSVIAGQPSTNKPTEELSIKLAERRRA
NRMAERDVGDWLYARFLKPFEGTDQVFPAEIIDITRGGVRVRLTDNGAVAFIPAPFLHAV
RDEIQCSQETGSVLIKGEPAYKLNDIIHVNIAEVRMETRNIVARPAA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaacccattgctcgcgcaactcaaacagcagctacattctcaaacccca
cgagttgagggtttgataaaaagtaccgacaaaggtttcggttttctcgaagtagatgga
caaaaaagctactttgtacctcctccgcagatgaagaaagtcatgcatggtgaccgtgtt
gtggctgctattcataccgataaagaccgtgaattcgctgagccagaagaacttgtcgaa
ccttttctcacgcgttttgtaggtcgaattcagaaaaaagataatgataaccgtttattc
gttattccagatcatccgctactaaaagatacgatttcttgccgcccaaccaaagacgtt
acccatgaatttgcacaaggagattgggttgttgctgaaatgcgtcgtcaccccttaaaa
ggtgataaaggtttttacgctgacattacagaattcattacggatggtgaagaccatttt
gcgccttggtgggtaacactgcgtcgtcatcaacttgatcgtgcagagccacaaatggtg
gatagtgaacgtgacgatgaaggcattgaacgcattgacctcactcaccttcattttgtc
actatcgatagtgccagcacggaagatatggatgatgcgctctatgttgaaagaacccct
gaaggtaatctaaagctttatattgctattgccgatccaaccagttatatcaaagaaggc
agtgaattagataaactggctttggcacgttcttataccaattatcttcctggttttaac
attccaatgctacctcgtgagctatccgacaacctatgctctttgcgccctaatgagcag
cgccctgcacttgtctgtgccacgacgatattagcagatggcagtatcgctgaagatatt
caattctttagtgcttgggttgagtctaaatctaaattggtttacgacgaagtttctgat
tggttggaaaaaacaggtagttggcagccagctaatccagcggatcaacaacagatcgag
ttactaaaagagatggctgataaacgccatcaatggcgtcaacaaaatgcactggtgttt
aaagatcgccctgattatcgtttcctattagatgataaaggcaatgtcattgatatcatt
gtagaaagccgccgtacagcaaatcgtattgtcgaagaagccatgataacggctaacctg
tgtgcagcaatacaactgaaaaacagcttaggttttggtgtatttaatgtccacatgggc
tttgaaccattacaaattgaccaagtcgtacaaacgttgaaagatcatggtatcgaaacg
accgcggacgcattgctaactttggaaggtttccgtcaactacgtcgtcagttagatgca
caaccgacccaattcttagacagtcgtatccgccgcttccaaacatttgctgaggtgaaa
agtgaacccggcccgcattttggcttaggttttgacgcttacgcaacttggacatcaccg
attcgtaaatatacagacatcgttaaccatcggttattaaagtctgtgattgctggccag
ccttcaacgaataagccaacagaagagttgtcaataaaattagctgaacgccgccgtgca
aaccgcatggctgaacgcgatgtcggtgattggctatatgcgcgtttcttaaagccattt
gaggggactgaccaagttttcccagcggagatcatcgatattactcgtggtggtgttcgt
gtccgactcaccgataatggtgctgttgcttttatcccagcgccgttcttacatgctgtg
cgcgacgaaatacaatgtagccaagaaacgggcagcgtattaattaaaggtgaacctgcg
tacaaactcaacgatattattcatgtcaatatcgccgaagtgcgtatggaaacacgtaat
attgttgctcgccccgccgcataa
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