Providencia vermicola: G3341_14245
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Entry
G3341_14245 CDS
T06449
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pvc
Providencia vermicola
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvc03009
]
G3341_14245
Ribosome biogenesis [BR:
pvc03009
]
Prokaryotic type
ribosomal protein modification factors
G3341_14245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QIC16764
LinkDB
All DBs
Position
3154069..3155823
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AA seq
584 aa
AA seq
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MTQTFIPGKDAALEVSIDAFQTKLKKLGFDIEEASWLNPVPNVWSVHIRDKECPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGKSIAEGDFVHYPNEKWFPLTDDDSLPEG
ILDARLRQFYDPDGALAGSQLIDLQSGNEERGICALPFTRQSDNQTVYIPMNIVGNLYVS
NGMSAGNTANEARVQGLSEVFERFVKNRIIAESISLPAIPTDVMARYPNVVEAVETLEKE
GFPIFCYDASLGGQFPVICVVLFNPQNGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFNAPTFDDEEVAEHTNLETHFIDSSGLISWDLFKDEADYPFVDWSFKGTTQEEFATLM
GIFNQLDAEVYIADYHHLGVYACRILVPGMSDIYPVEDLHIANNAMGAHLRDTIINLPDS
QWEKQDYLNLIEQLDDEGLDDFTRVRELLGLAVGKDNGWSHLRIGELKSMLALAGGDLEQ
ALAWVEWTQDFNSSVFTAERANYYRCLHTLLLLNQEEQRDKSQYYTAFVRMYGQKTVDAA
SAALSGESCFYGLWSIDDELTALPAHQALLAAYEKLQKAKRENA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaacctttatcccaggcaaagacgccgcccttgaagtgtctattgacgctttt
caaactaaattgaaaaaactaggctttgatattgaagaagcctcatggctaaatcctgtg
cctaacgtttggtcagtccatattcgtgacaaagagtgtccgctatgctttaccaacggt
aaaggcgccagcaaaaaagccgctcttgcttcagcccttggcgaatacttcgaacgttta
tccactaactacttctttgccgatttttatttaggcaagtctattgctgaaggcgatttt
gttcattatccaaatgaaaaatggttcccactcaccgatgatgatagtttgccagaaggt
attttagatgctcgcttacgccaattttatgatcctgatggtgcattagcaggcagtcaa
ttaattgatttgcagtcaggaaatgaagagcgaggtatctgtgcgctaccttttactcgc
caatctgataatcaaaccgtttatattccaatgaatattgttggtaacctgtatgtgtct
aatggcatgtcggcaggtaacacggcaaatgaagcacgtgtgcaaggattatctgaagtc
tttgagcgttttgtgaaaaatcgtattattgcggaaagtatcagcctacctgcaatcccg
acagacgttatggctcgctacccaaatgttgttgaagccgttgaaaccttagaaaaagaa
ggcttcccaatcttctgttatgacgcgtctctcggcggccaatttcctgtgatctgtgtt
gtgctatttaatcctcaaaatggcacctgttttgcttcttttggtgcgcatcctgatttt
ggtgttgccttagagcgtacagtcaccgaactgctacaaggccgtggcctcaaagatctt
gatgtgtttaacgcgccaacatttgacgatgaagaggtggctgaacacacaaacttagaa
acccacttcattgactcaagtggacttattagctgggatctgtttaaagatgaagccgat
tacccatttgttgattggagtttcaaaggcaccactcaagaagagttcgccacattgatg
gggatctttaatcaattagatgcggaagtgtatatcgccgattaccaccatttaggcgtc
tatgcatgccgtattcttgtgcctggtatgtctgatatttatcccgtagaagatctgcat
attgccaacaatgcaatgggcgcacatttacgcgataccattattaacctgcctgatagt
caatgggaaaaacaagattacctcaatcttattgagcagcttgacgatgaaggcctagat
gattttactcgtgtacgtgaattattgggtcttgccgtaggcaaagataatggctggagt
cacttacgtattggcgaattaaagtctatgttagccttagccggtggcgaccttgagcaa
gcgctcgcttgggttgagtggacacaagactttaacagctccgtatttacagctgaacga
gcgaattattaccgctgtttacacaccttgctgttattaaatcaagaagagcagcgtgat
aagtcacaatactacactgcatttgttcgcatgtatggtcaaaaaactgtcgacgccgct
tccgccgctctttcaggtgaatcatgcttttatggtttgtggtctatcgatgatgaatta
acggcattaccagcacaccaagcgttacttgcagcctatgaaaaactgcaaaaagctaaa
cgtgaaaatgcctaa
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