Providencia vermicola: G3341_15255
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Entry
G3341_15255 CDS
T06449
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pvc
Providencia vermicola
Pathway
pvc03030
DNA replication
pvc03430
Mismatch repair
pvc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3341_15255 (holA)
03430 Mismatch repair
G3341_15255 (holA)
03440 Homologous recombination
G3341_15255 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvc03032
]
G3341_15255 (holA)
03400 DNA repair and recombination proteins [BR:
pvc03400
]
G3341_15255 (holA)
Enzymes [BR:
pvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G3341_15255 (holA)
DNA replication proteins [BR:
pvc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G3341_15255 (holA)
DNA repair and recombination proteins [BR:
pvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G3341_15255 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QIC16947
LinkDB
All DBs
Position
3375715..3376749
Genome browser
AA seq
344 aa
AA seq
DB search
MIRIYPEQLASQLQDSLKGRYLIWGNEPLLIQESQDAIRKTAQSQGFEEHFTFSLEPQTD
WDEIFSLCQALSLFASRQSLTLILPENGPNAAMAEKLTQLAQLLHPDILLLLRGQKLTKA
QENSAWFKAISNEGVYVSCLTPEYQRLPQWVAKRANTMHLTLETEANQLLCYCYEGNLLA
LAQALERLSLLYPDGKLTLPRVETAVNDAAHFTPYHWVDALLAGKSRRAWHILEQLQRED
TEAVILLRAIQRELMLLLTLKRQSATASLKSLFDQHKIWQNRRPLLTAALQRLSLHQLQS
ALLLLTQAELHAKQDFSHSVWPDLQSLSMLICTKALPESFIHDL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtatctatcctgaacagctggcctctcagttacaagattcactgaaaggccgc
tatttaatctggggcaatgagcccctattaattcaagagagccaagatgcgattcgaaaa
acagcccaaagtcaggggttcgaagaacattttactttctcacttgagccacagactgat
tgggatgaaatttttagcctctgtcaggctctcagtttattcgccagccgccaatcgtta
accttaattttgcctgaaaacgggcctaatgctgccatggctgaaaagctgactcagcta
gctcaattactccatcctgatattctgttattgctgcgtggacaaaaactcacgaaagct
caagagaatagcgcttggtttaaagctataagcaatgaaggtgtctatgtcagttgctta
acccctgaataccaacgattgccgcaatgggtagctaagcgcgccaatactatgcaccta
accttagaaacagaagcgaaccaactgctttgctactgttatgaggggaatttactggca
ttagctcaagccctagagcggctatcattactttatcccgacggtaagttaacattgcca
cgcgtcgaaacagcggtcaatgacgcagctcattttacgccttatcattgggtcgatgca
ctattagcgggtaaatcgcgccgtgcttggcatatcttagagcagttacaacgcgaagat
accgaggctgtgattttactgcgtgctatccagcgtgaactaatgcttttactgacttta
aagcgccagtcagcgacagcatcattaaaatccttatttgaccaacacaaaatttggcaa
aaccgccgcccattactgacggcagcattacagcggctaagtttacatcaattacaatcg
gctcttcttttgctaacccaagcagaactacatgctaaacaagactttagtcactcggtg
tggccagatttacaatccttgtctatgttaatatgtaccaaagccttaccagagagtttt
atacatgacctttaa
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