Providencia vermicola: G3341_15525
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Entry
G3341_15525 CDS
T06449
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pvc
Providencia vermicola
Pathway
pvc03030
DNA replication
pvc03430
Mismatch repair
pvc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3341_15525 (dnaE)
03430 Mismatch repair
G3341_15525 (dnaE)
03440 Homologous recombination
G3341_15525 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvc03032
]
G3341_15525 (dnaE)
03400 DNA repair and recombination proteins [BR:
pvc03400
]
G3341_15525 (dnaE)
Enzymes [BR:
pvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G3341_15525 (dnaE)
DNA replication proteins [BR:
pvc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G3341_15525 (dnaE)
DNA repair and recombination proteins [BR:
pvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G3341_15525 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Arena_ncap_C
Motif
Other DBs
NCBI-ProteinID:
QIC16997
LinkDB
All DBs
Position
complement(3433412..3436894)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTGPLVKKVAAMGMPALAITDFTNLCGLVKFYGAAHGA
GIKPIIGADFFVESEQLGDEIAHLTVLARNNEGYQNLTLLISEAYQKGYGAIGPTIHRDW
LVKHKEGLILLSGGRQGDVGQFLLRGNQTLVDECLAFYETHFPGCYYLELIRTGRPDEES
YLHAAVELATQRGLPVVATNDVRFIESSDFDAHEIRVAIHDGFTLSDPKRPKKYSPQQYL
RTEEEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPQFPTGDMKTEDFLVMRSKEGL
EERLEFLFPDEKVRAERRPEYDERLDIELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAQ
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLDKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKKGLEPIDIAAIPLDDQKSFDML
QRSETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAIKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARQKGGIFKEIFDLCARVDLKKINRRVMEKLIMAGAFDHLGPHRAALMS
SLEDALKAADQHAKAEAIGQTDMFGVLAEAPEQVESSYASVPKWPDQVVLDGERETLGLY
LTGHPITRYLSEIERYTNGLRLKDVNPTPRGQVTTVVGLVLSAKVITTKRGNRIGICTLD
DRSGRLDIMLFSDALDKYQHLLEKDTILIATGQVSFDDFNGGNKMTVRELMDISEAREKY
ARGLAISLSDKQINDQLLNRLRSTLEPHRSGTIPVHLYYQKDDARAKLKFGVIWRVTPVD
DLLNSLRTLLGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctcgttttattcacttacgtgttcatagtgattattcaatgattgatggg
ctggcaaaaactggcccattagtcaaaaaagtggcagcaatggggatgccagcacttgct
attaccgattttacgaacctgtgcggtttagtaaaattctatggagcagcgcacggtgct
ggtatcaaacccatcattggggctgacttttttgttgaaagcgagcaactcggcgacgaa
atcgcacacttaaccgtgttggctcgtaacaatgaagggtatcaaaacctaactcttttg
atctcagaagcgtatcaaaaaggttacggtgcgattggcccgaccattcaccgtgattgg
ctggtaaaacataaagaaggactgattttactgtctggtggccgccaaggggatgtcggg
cagtttttattacgtggtaatcaaacgctggttgatgaatgcttagcattttatgaaacc
cactttcctggttgttattatcttgaattaattagaacaggaaggcctgatgaagaaagc
tatttgcatgcggcggtggagcttgccacacagcgtggtttgccggttgttgcaacgaat
gatgtacgctttattgaaagtagcgattttgatgctcatgaaatacgtgtagcaatccat
gacggatttaccttatctgaccctaaaaggcctaaaaaatatagccctcagcaatactta
cgtacggaagaagagatgtgcgagctattcgccgacatccctgaagcgcttgaaaatagt
gtagagattgctaagcgttgtaatgtcaccattcgtctcggtgagtactttctcccccaa
ttccctactggggacatgaaaacagaagactttttggttatgcgctcaaaagaaggatta
gaagagcgcctcgagtttctattccctgatgagaaagtgagagcagaaagacgacctgaa
tatgatgagcgtttagacattgagcttaacgttattaaccaaatggggttccctggttac
tttttgatcgtgatggagtttattcaatggtcgaaagataatggcgtaccagttggtcca
gggcgtggttccggtgcggggtcacttgttgcatatgcgctgaaaattaccgatttggat
cccttggagttcgacctcctttttgaacgattcttaaacccagaacgtgtttccatgccg
gactttgacgtcgacttttgtatggaaaaacgtgatcaggtgattgaccacgttgctcaa
atgtatgggcgagatgccgtttctcagattattacattcggtactatggccgcaaaagcg
gtgatccgcgacgtagggcgagtattggggcatccgtatggcttcgtggatcggatttcg
aaattggttcctcctgatccgggtatgactctagataaggcatttgaagccgaaccacag
ttacctgaaatttacgaggcagatgaagaagttaaagcgctgattgatatggcgcgtaaa
cttgaaggtgtcacgcgtaacgcaggaaaacatgcggggggcgttgttattgcccccacc
aaaattacagactttgcgccgctttattgtgatgcggaaggtaataacccagttactcag
ttcgataaaaatgatgtcgaatatgcggggttggtcaagttcgactttttggggttacgt
accctaacgatcatcaactgggcattagagatgatcaatgcaaggcgagccaagaaaggg
cttgagcctatcgacattgccgcaatcccgctggatgatcaaaaaagttttgatatgttg
caacgttcagaaacgaccgcggtattccagctggaatcccgaggcatgaaagatctgatc
aagcggctacgtcctgactgttttgaagatatgatcgcattggttgccttgttccgtcct
ggtccattgcaatcagggatggtagataactttatcgaccgtaaacatggtcgtgaagag
atctcatacccagacgtacagtggcaacatgaatcattaaaacctgtcttggagccaact
tacggtattatcttataccaagaacaggttatgcagattgcacaggtattagcgggttat
acgctaggtggcgcagatatgttgcgccgtgcaatggggaaaaagaaacccgaagagatg
gcgaaacagcgttctgtttttgaagagggcgcgatcaaaaatggagtcgatggggaactg
tcgatgaaaatctttgatctggtagaaaagtttgctggttatggatttaacaagtctcac
tcagcggcttatgctctggtttcgtatcaaacattgtggctgaaagctcactatccagct
gaatttatggctgcggtaatgacggcggatatggataataccgaaaaggttgtcggtctc
gtcgacgaatgttggcggatgggattgaaagtattaccacctgatattaatagtggactt
tatcattttcatgttaacgatgaaggtgaaattgtttatggcattggtgccatcaaaggg
gttggtgaagggccgatcgaagccattatcgaagctcgccagaaaggtggtatatttaaa
gaaatatttgatctttgtgctcgcgttgatctgaaaaaaattaaccgccgtgttatggaa
aaactgatcatggcgggggcatttgatcatttaggtccccatcgtgcggccttgatgtct
tcattagaagatgctttgaaagcggcggatcagcatgcaaaagcagaagctatcgggcaa
acggatatgtttggtgtgctggcggaagcacccgaacaagtagaaagttcatacgcaagc
gtccccaaatggcctgatcaagtcgtacttgatggcgagcgagaaacattggggctttac
ttgacagggcacccaataacgcgctacttaagtgagatcgagcgctatactaatggttta
agattaaaagatgtgaacccaacccctcgtggtcaagtgacaactgtggtaggtttagta
ctttcggccaaagttattacgactaagcgcggcaatcgaatcggaatttgtacgcttgat
gatcgttccggtcgtctggatattatgttattttcagatgcactagataaataccagcac
ttgctggaaaaagacactatcctgattgccaccggtcaggtcagctttgatgattttaac
ggtggtaataaaatgacagtacgggagttaatggatattagtgaagcaagggaaaaatat
gcgcgaggacttgctatttcactgtcagataaacaaattaatgatcagttgctgaaccga
cttcgcagcactcttgaaccccatcgttcaggaacgattccggttcatttgtattatcag
aaggatgacgccagagccaaacttaaatttggggttatttggcgtgtgacacccgttgat
gaccttctgaactctctgcgaactctgctgggtaatgagcaggtagaattagaatttgac
taa
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