Providencia vermicola: G3341_15735
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Entry
G3341_15735 CDS
T06449
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pvc
Providencia vermicola
Pathway
pvc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G3341_15735 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvc03400
]
G3341_15735 (recB)
Enzymes [BR:
pvc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G3341_15735 (recB)
DNA repair and recombination proteins [BR:
pvc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G3341_15735 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QIC17035
LinkDB
All DBs
Position
complement(3478000..3481611)
Genome browser
AA seq
1203 aa
AA seq
DB search
MSKMQISSQLLDAFSLPLQGQRLIEASAGTGKTYTIGILYLRLLLGLGRENAFSRPLTVE
EILVVTFTEAATNELRGRIRERIHKMRLACIRNGVGFEKEPEYLELLSQITTPEQREFAI
SWLLTAERQMDEAAIYTIHGFCQRMLVHNAFESGVLFEQTMIQDELPIQKQACADFWRRH
FYPLDYSMTKVVLSQWNSPEALLAEIKPFLQGDMPDIVNEQQRTETFEERHQRLIELITQ
VKSLWLANCSEFERLISNSDVDKRSYSSRFLPSWLEKMLRWAEEETQDYQLPKEIVRFSQ
AVLHEKSKSGSGPEHAVFARIDELLSQSLTIKDLIIPLAITEVRQNIIQEKYHRGEMGFD
DLLTRLDSALKQQGGKYLAEAISQRYPVAMIDEFQDTDPQQYRIFQRIYGGVENSALLFI
GDPKQAIYAFRGADIFTYIEAKKQVNAHYTLETNHRSSQHMVEAVNHVFSYCDNPFIFEQ
IPFNPVNFAERNAGKMLCHNGEAVKALTFWQINAEAVSIADYEHTMAAQCAAQISQLLQG
GLKGTTVFQQQDGKEIPVSAADITVLVRSRREAMLIRDALNQLSIPSVFQSNRESVFSTQ
EARDLLWILQAVLSPEKERVLRSALATGTLGLNAKEIDTLNYDEKAWEALVDEFTRYSII
WRKQGVLPMLRVLMSERHIAETFLSSVDGERRLMDFMHIGELLQEMSLQLEGEHTLVRWL
TQQIADPDHQSNAQQMRLESDKHLVQISTIHKSKGLEYPIVWLPFASNFLPQSKALYHDR
DNYRTRLDLADNEENIALADEERLAEDLRLLYVALTRAIYHCSVGIAPIIKGNRKKSGET
DLHLSALGYLIQKSEAGDFTLLDKGLAELTNTVINVERIEQIEPISLALNQGDSEALSAR
NVTRFFDDHWRVTSYSGLSYRRSYGESEQVISAEQLASSLAPKMDIEVSIDTTLPLADEH
ILTPHQFPKGTAPGTFLHELMEEIEFSKDVPLEWLQEKLQISGFDTQWAEMLQEWLMAIV
QAPLAEDGLCLSALAPQDMLDEMQFYLPIDKLLDPQAVDRVTHQYDPISAACPPLSFEEV
QGILKGFIDLTFLWNGKFYLLDYKSNYLGGDASCYTQSAMVEAMIDHRYDLQYQLYSLAL
HRYLKQRVPNYQYDIHFGGVYYLFLRGIDKAESNNGIFYYRPEPEFIDAFDQLFLNVQEG
STS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaatgcagataagttcccaactgttagatgctttttccctacccttacaaggg
cagcggttaattgaggcatcggcgggtacaggtaaaacctatacgatagggatcctctat
ctgcgtttattattagggttaggccgagagaatgccttctctcggcctcttactgtagaa
gaaatcctagttgttacctttacagaagctgccactaatgaactacgaggacgtatccgt
gagcgaatccataaaatgcgtcttgcttgtattcgtaatggcgttggttttgaaaaagaa
cctgaatatttagagttgctttcacaaattacgacaccagagcaacgagagtttgcgatt
agttggttgctgacagctgaacgccaaatggatgaggcggcgatttataccattcatgga
ttttgccaaagaatgttggtgcataatgcttttgaatcaggggttttattcgaacaaacc
atgatccaagatgaacttccgattcaaaagcaagcttgtgcagacttttggcgacgacat
ttttacccgcttgattattcaatgacgaaggttgttttgtcgcaatggaatagccctgaa
gcactgctggcggaaattaaaccttttttacagggtgatatgcccgatatcgttaacgaa
cagcagcgtacggaaacgtttgaagagcgccatcaacgcttaatagagctgatcactcaa
gtgaagtctttatggctagcgaattgttctgaatttgaacggcttatctctaattcagat
gttgataagcggagctatagctctcgttttttacctagctggttagaaaaaatgctgcgt
tgggcggaagaggaaactcaggattatcaattaccaaaagaaattgtgcgtttttctcaa
gcagttttgcatgagaaatcaaaaagtggttcagggccagagcacgccgtttttgcgcgt
atcgacgagctactttcccaatcattaacaattaaagacttgatcatcccactggcaata
actgaagtgagacaaaatattattcaggaaaaatatcatcgtggggagatggggtttgat
gatttacttactcgtttagacagcgcactaaagcagcaaggtggaaaatatttagcagaa
gcaattagccaacgttatcccgtggcaatgattgatgaatttcaggacacagacccccaa
caatatcgtatttttcaacgaatttatggtggtgtcgaaaatagcgcattgctgtttatc
ggtgatccaaagcaagcgatatatgcatttcgtggtgctgatatttttacttatattgaa
gcgaaaaaacaggtcaatgcccattacacattagaaactaaccatcgctcatcacaacat
atggtggaagcggttaatcatgtttttagctattgtgacaatccgtttatttttgaacaa
attccatttaatcccgtcaattttgcagaaagaaacgctggtaagatgctttgtcataat
ggtgaggcagtaaaagcgctaactttttggcaaattaatgctgaagccgtttctattgct
gattatgaacacacgatggccgcacaatgtgccgcacagattagccagctattacaaggt
ggcttgaagggaaccaccgtttttcagcagcaagatgggaaagaaatacccgtctctgct
gctgatattacggtactggtaagaagtcggcgcgaggcaatgttaatacgcgatgcctta
aaccagcttagtatcccatctgtttttcaatcgaatcgagagagtgtgttttcaacccaa
gaagcacgagacttactgtggatccttcaggccgtattgtcacctgagaaagagcgtgtt
ttacgtagtgcattagcgacaggcacattaggattaaacgctaaagaaattgatactctc
aactatgatgaaaaagcgtgggaagctttagttgatgaatttacccgatactccattatc
tggcgtaagcagggcgttctaccgatgcttagggtgttaatgtctgaacggcatattgct
gaaacttttctttcttcagttgacggtgaacgacgtctaatggactttatgcatattggt
gagttgctgcaagaaatgtctcttcaactcgaaggggagcatacattggttcgttggcta
actcagcaaatagcagatcctgaccatcaatctaacgcgcagcaaatgcgtttagaaagt
gataaacaccttgttcaaattagtactattcataaatcgaaagggcttgaatacccaata
gtttggttgccttttgccagtaattttttacctcaatcaaaggcgctttatcatgatagg
gataattatcggacacgtttagaccttgcggacaacgaagaaaacattgctttggcagat
gaagaacgtttagcggaggatctacgattactctatgtcgccttaactcgagcgatttat
cattgtagcgtaggtattgcaccaatcatcaaaggcaaccgtaagaaaagtggagaaact
gacctgcatttatcggctttaggctatttaattcaaaaaagtgaagcgggtgattttacg
ttgctcgataaagggctagcagaattaacgaatacagtgattaatgttgagcgaattgaa
caaatagagccaatttcgctagcgttgaatcaaggtgactcagaggcgctatcagcaaga
aatgtgacgcgcttctttgatgatcactggagagtcacgagttattcggggttaagttat
cgcaggtcttacggtgagagtgagcaagtaattagtgcagagcagttggcaagttcgctt
gcaccaaagatggatattgaagtcagtatcgataccactttacccttagcggatgagcac
attttaacaccacaccaattccctaaagggaccgcacccggaacatttctgcatgaatta
atggaagaaattgagttttcaaaagacgttcctctagagtggttgcaggaaaagcttcaa
atatcgggctttgatacgcaatgggctgaaatgctacaggagtggttaatggcgattgtt
caggcgccacttgcggaagatggcctatgtttatccgctttagcgcctcaagatatgctc
gatgagatgcaattttatttacctatagataagttattagacccccaagccgttgaccgc
gttactcatcaatatgatcctatatctgctgcttgccctccactgagttttgaagaagta
cagggcattttaaaaggttttattgatttaacatttttgtggaatggtaaattttatcta
cttgattataaatcaaattaccttggaggggatgccagttgttatacgcaatcggcgatg
gtcgaggccatgatagatcatcgttatgatctccaatatcaattgtactcattagcatta
catcgttatctaaaacaacgggtgcctaactatcagtacgatatccattttggcggtgtt
tattatctcttcttacgcggtattgataaggctgagtcaaataacggtattttttactat
cgacctgagcctgaatttatagatgcatttgatcagctatttctcaatgtacaagaaggg
agcacatcatga
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integrated database retrieval system
