Providencia vermicola: G3341_16830
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Entry
G3341_16830 CDS
T06449
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pvc
Providencia vermicola
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvc03021
]
G3341_16830 (rpoH)
Transcription machinery [BR:
pvc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G3341_16830 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_10
KORA
HTH_3
IF2_N
UCR_14kD
SANT_DAMP1_like
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QIC17238
LinkDB
All DBs
Position
complement(3721406..3722281)
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AA seq
291 aa
AA seq
DB search
MTKDMQSLALVPQGSIEAYMRAANAYPMLTAEEEKELAERLHYHGDLDAAKQLILSHLRF
VIHVARSYAGYGLPQADLIQEGNIGLMKAVRRFNPEIGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKSQRKLFFNLRKNKKRLGWFNQDEVDMVAKELGVSTKDVREMESRMAAQDM
AFDMSDDDDSGDLGQPVAPVLFLQDKSSDFAGSIEEDNWESHATDRLTEALESLDERSQD
IIRARWLDDDNKTTLQELADKYGVSAERVRQLEKNAMKKLRAAMEDDEESD
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagacatgcaatcattagcacttgttccgcaagggagtattgaagcttatatg
cgggctgccaatgcttatcctatgctaaccgctgaggaagaaaaggaacttgctgaacgg
ctgcattaccatggtgatctggatgcggcaaagcagctgatcttatcgcacttacgtttt
gtgatccatgttgctcgtagctacgcaggttatggcctaccgcaagcagatttaattcag
gaagggaatatcggcttaatgaaagccgttcgtcgttttaaccctgaaatcggtgttcgc
ctagtctcctttgcagtccattggatcaaagctgaaattcatgaatatgtgttgcgcaat
tggcgtattgttaagattgccacaactaaatctcagcgtaagttattttttaatttgaga
aaaaataaaaaacgccttggttggtttaaccaagatgaagttgatatggttgctaaagag
ttaggggttagcaccaaagatgtacgtgaaatggaatcacgtatggctgcacaggatatg
gcttttgatatgtctgacgacgatgacagtggtgacttaggtcaaccggttgcacctgtc
ttattcttacaagataaatcatcggattttgctggttctatcgaagaagataactgggaa
agtcatgcaaccgatcgtttaacggaagcattagaatcgttagatgaacgtagccaagat
attattcgtgcgcgttggcttgatgacgacaataaaaccacattgcaagagttggctgat
aagtatggtgtttctgccgaacgagtacgtcagcttgaaaaaaatgcaatgaaaaagttg
cgcgctgcaatggaagacgacgaagaaagcgattag
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