Providencia vermicola: G3341_18050
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Entry
G3341_18050 CDS
T06449
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pvc
Providencia vermicola
Pathway
pvc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
G3341_18050 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvc03019
]
G3341_18050 (orn)
03009 Ribosome biogenesis [BR:
pvc03009
]
G3341_18050 (orn)
Messenger RNA biogenesis [BR:
pvc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G3341_18050 (orn)
Ribosome biogenesis [BR:
pvc03009
]
Eukaryotic type
Pre-60S particles
RNases
G3341_18050 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QIC17462
LinkDB
All DBs
Position
complement(3982245..3982787)
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AA seq
180 aa
AA seq
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MQKNENNLIWIDLEMTGLDPERDRIIEIATIVTDSQLNILAQGPVIAIHQTQAQLDLMDE
WNVNTHTGSGLVERVKSSTFSEHDAELATIAFLEQWVPKGASPICGNSVGQDRRFLFRYM
PELESYFHYRYLDVSTLKELARRWKPEILGGFTKKGTHQALDDIRESIAELAYYRETFIK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaatgagaataatttaatctggatcgatttagaaatgaccggtctcgatcct
gagcgtgaccgtattatcgaaatcgcgactattgttacggacagtcaacttaatatttta
gcacaaggtcctgtcattgcgattcatcaaacacaagcgcaattggatttgatggacgaa
tggaatgtcaatacgcatacaggaagtggattagttgaacgtgttaaaagcagtacgttc
agtgaacatgacgctgaattagcgacgattgctttcttagagcagtgggtgccaaaaggc
gcttcaccaatttgtggtaatagtgttggtcaagatcgtcgttttttatttcgctatatg
cctgaattagaaagttatttccattatcgctaccttgatgtcagcacattaaaagagcta
gctcgtcgttggaaaccggaaatactggggggatttacgaaaaaaggtactcatcaagca
ttagatgatattcgtgaatccattgctgaattagcctattaccgcgaaacttttattaaa
taa
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