Providencia vermicola: G3341_18380
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Entry
G3341_18380 CDS
T06449
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pvc
Providencia vermicola
Pathway
pvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G3341_18380 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvc03019
]
G3341_18380 (rhlB)
Enzymes [BR:
pvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G3341_18380 (rhlB)
Messenger RNA biogenesis [BR:
pvc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G3341_18380 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QIC17518
LinkDB
All DBs
Position
4053676..4054962
Genome browser
AA seq
428 aa
AA seq
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MSKAHLTEKKFSDFALHPKVIEALNKKGFNFCTPIQASTLPFTVEGKDVAGQAQTGTGKT
LAFLTSTFHYLLTHPAIEGKQANQPRALIMAPTRELAVQIYSDAKELAEYTGLKMGLAYG
GDGYDEQLKVLQRGVDILIGTTGRLIDYAKQGHVDLGAVQVVVLDEADRMYDLGFIKDIR
WLFRRMPSVAERLNLLFSATLSYRVRELAFEQMSNPEYIEVEPLQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPERCIIFANTKHRCDEIWAHLAADGHRVGLLTGDVAQKKRLRILE
EFTQGNLDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYALNLPAIEDYIQHSIPVSKYNSEALLTDLPTPKRRHRPRPGGPRRNSNSPRRHNGP
RNNHKRSG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcacacttgacagaaaagaagttttccgacttcgccttgcacccaaaagtc
attgaagccctgaataaaaaaggcttcaatttttgcacgcctatacaggcttctaccttg
cctttcactgtcgaaggcaaagatgttgcggggcaagcgcaaactggaaccggaaaaacg
ttagcatttttaacgtctacatttcattatttactaactcaccctgccattgaggggaaa
caagccaatcagcctcgcgctcttatcatggcaccaacgcgtgaattggcggtacaaatc
tactcggatgccaaagaacttgccgagtatactggcttaaaaatggggcttgcttatggt
ggcgatggttatgatgagcaattaaaagtgctacaacgtggtgttgatatcctaatcggc
acgactgggcgtttaattgactacgctaaacaagggcatgttgacttaggtgcagtacaa
gttgttgtccttgatgaagcggatcgcatgtatgaccttggctttattaaagatattcgc
tggctatttcgccgtatgccatccgtcgctgaaagattgaatctcctcttttcagcaacg
ctttcttatcgcgtaagagaactggcatttgaacaaatgagtaaccctgaatatattgaa
gtcgagccattacaaaaaacaggtcaccgtattaaagaagaactgttttatccttcaaat
gaagaaaaaatgcgcttattacagacgctactagaggaagagtggccagagcgttgcatt
atttttgctaacaccaaacatcgttgtgatgaaatttgggcacaccttgctgctgacgga
catcgcgttggtctcttaacaggggatgtcgctcaaaagaaacgtctgcgcattttagaa
gagtttacacaaggcaaccttgatattttagtggcgaccgatgttgcagcccgtggctta
cacattccttcagtgacccatgtttttaactatgatttacctgacgattgtgaagactat
gtacaccgtattggtcgtaccggccgagccggtgaaagtggtcattcaatcagtctcgct
tgtgaagaatatgcgttgaatctaccggctattgaagactatattcaacattcgatccca
gtgagcaaatataacagcgaagcgttattaaccgaccttccgactccgaaacgtcgccat
cgtccgcgtccaggagggcctcgtcgcaattcaaattcgccacgtcgccataatggccca
cgtaataaccataaacgttcaggctga
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