Pseudomonas viridiflava: CFBP1590_0089
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Entry
CFBP1590_0089 CDS
T06554
Symbol
glyS
Name
(GenBank) Glycine--tRNA ligase beta subunit
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CFBP1590_0089 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvd01007
]
CFBP1590_0089 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvd03016
]
CFBP1590_0089 (glyS)
Enzymes [BR:
pvd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
CFBP1590_0089 (glyS)
Amino acid related enzymes [BR:
pvd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CFBP1590_0089 (glyS)
Transfer RNA biogenesis [BR:
pvd03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CFBP1590_0089 (glyS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
YmgM
DUF7596
Motif
Other DBs
NCBI-ProteinID:
SMS07674
UniProt:
A0A1Y6JCX3
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All DBs
Position
I:complement(10955..13009)
Genome browser
AA seq
684 aa
AA seq
DB search
MSAQDFLVELGTEELPPKTLSSLADAFLAGIEKGLQSAGLTYSAKQVYAAPRRLAVLITE
LSTQQPDRAVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQNIVG
KPTVSLLPTIVEDSLNDLPIAKRMRWGARKEEFVRPTQWLVMLFGDQVVDCTILAQTSGR
HSRGHRFHHPEDVRISSPAGYLSDLRAANVLADFNERRQIISKRVEELATQQEGTAIVPP
GLLDEVTGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDADGKLLPRFITVA
NIESKDPAQIIAGNEKVVRPRLTDAEFFFKQDKKQKLETFNERLKNVVFQAQLGSVYDKA
ERVSKLAAYIAPRIGGDAQRAARAGLLSKCDLSTEMVGEFPEMQGVAGYYYAKADGEAED
VALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAAL
GILRILIEKKLDLDLIETVKFAVTQFGAKVKSAGLPEQVLEFIFDRLRARYEDEGVEVAV
YLSVRALQPGSALDFDQRVQAVQAFRKLPQAAALAAVNKRVSNLLSKAEGNIAQTVEPKY
FDNANEFSLYSAIQQADHAVQPMAAERQYSESLARLASLREPVDAFFEAVMVNAEDANVR
ANRYALLARLRGLFLGVADISLLG
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctcaagattttctcgtagaactgggcaccgaagagctgccgcccaagaccctg
agttcgctggccgacgcgtttctggccggcatcgaaaagggcctgcagagcgctggcctg
acttacagcgccaaacaggtctacgccgcaccgcgtcgtctggctgtgctgatcaccgag
ctgtccacacagcaaccggatcgtgcagtcaatctggacggcccgccacgtcaggcggcg
ttcgatgctgatggcaaccctacacaggctgccctgggcttcgccaagaagtgcggcgtt
gacctgagcgaaatcgatcagagcggcccgaagctgcgttacagccagaacatcgtcggc
aagccgaccgtgtcgctgctgccaaccatcgtcgaagactcgctgaatgacctgccgatt
gccaagcgcatgcgctggggtgctcgcaaggaagagttcgtgcgtccgacccagtggctg
gtgatgctgttcggcgatcaggtcgtcgattgcacaatcctggctcaaacctcgggtcgt
cattcgcgtggccaccgcttccatcatccggaagacgtgcgcatctcctcgcctgccggc
taccttagcgacctgcgtgcagccaatgtactggctgacttcaacgagcgtcgtcagatc
atcagcaaacgcgtcgaagagctggccacccaacaggaaggcacagccatcgtgccgcca
ggcctgctggacgaagtgaccggtctggtcgaatggcccgtgccgctggtgtgctcgttc
gaggaacgtttccttgaagtgcctcaggaagcgctgatcaccaccatgcaggacaaccag
aagtacttctgcctgctggatgccgacggcaagctgctgccgcgcttcatcacggtcgcg
aacatcgagagcaaggaccctgcacagatcatcgccggtaacgagaaggtggttcgccca
cgcctgaccgacgccgagttcttcttcaagcaggacaagaagcagaagctggagacgttc
aacgagcgtctgaagaacgtcgtgttccaggctcagttgggcagtgtctatgacaaggcc
gagcgcgtttccaagctggccgcctacatcgcaccacgcatcggcggcgacgctcagcgt
gcagcgcgtgcgggtctgctgtccaagtgcgacctgtcgaccgaaatggtcggcgagttc
cccgagatgcagggcgtggcgggttactactacgccaaggccgacggtgaagccgaagac
gtggctctggcgctgaacgagcagtacatgccgcgtggcgcaggtgccgagctgccgacc
accctgaccggtgccgccgttgccatcgctgacaagctcgacacgctggtgggtatcttc
ggtatcggtatgctgcccaccggcagcaaggacccctatgcactgcgtcgcgcagcgctg
ggtatcctgcgcatcctgatcgagaagaagctggacctggacctgatcgagaccgtgaaa
ttcgcagtcactcagttcggtgccaaggtgaagtcggccggtctgccggagcaggtgctg
gagttcatcttcgaccgtctgcgtgcgcgttacgaagacgaaggcgtcgaagtggccgtg
tacctgtcggtgcgtgcgctgcagccaggttctgcgctggacttcgatcagcgtgtgcag
gcggttcaagccttccgcaaactgccacaggcggccgcactggcagcggtgaacaagcgc
gtatcgaacctgctgagcaaggctgagggcaacattgcccagaccgtcgagccgaagtac
ttcgacaacgccaacgagttctcgctgtactcggcgatccagcaggccgaccacgctgtg
cagccaatggccgccgagcgtcagtacagcgaatcgctggcgcgtctggccagtctgcgt
gagccggtcgatgcgttcttcgaagcggtgatggtcaacgctgaagacgccaacgtacgt
gccaaccgctatgcgttgctggcccgcctgcggggcctgttcctcggcgttgccgatatc
tcgctgctgggctga
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