Pseudomonas viridiflava: CFBP1590_0164
Help
Entry
CFBP1590_0164 CDS
T06554
Symbol
algB
Name
(GenBank) Alginate biosynthesis transcriptional regulatory protein AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CFBP1590_0164 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pvd02022
]
CFBP1590_0164 (algB)
Two-component system [BR:
pvd02022
]
NtrC family
KinB-AlgB (alginate production)
CFBP1590_0164 (algB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
VpsR
AAA_22
AAA_2
cREC_REC
AAA_19
HTH_23
MCM
AAA_16
Xre-like-HTH
HTH_29
HTH_50
nSTAND3
HTH_17
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
SMS07749
UniProt:
A0A1Y6JD24
LinkDB
All DBs
Position
I:complement(85870..87216)
Genome browser
AA seq
448 aa
AA seq
DB search
MEAATENQGRILLVDDESAILRTFRYCLEDEGYSVATANSAAQADTLMQRQVFDLCFLDL
RLGEDNGLDVLAQMRVQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEIRKPKDGLDSHSPSMMAILETARQVAVTDANILILGESGTG
KGELARAIHGWSKRAKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRSGRF
REDLLYRLNVITLHLPALRERSEDILTLADRFLARFVKEYARPARGFSEEARAALLNYRW
PGNIRELRNVIERASIICPQERVEISHLGMAEQPANNAPRVGAALSLDELEKAHIGAVLA
TSDTLDQAAKTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagccactgagaatcagggccgtattctgcttgtggacgatgagtccgccatc
ctccgcactttccggtactgtctggaagacgaaggctacagtgtcgccactgccaacagc
gcagcgcaggcggacacattgatgcaacgccaggtattcgacctgtgctttctcgattta
cgcctgggcgaagacaatggcctggatgtgctggcacagatgcgggtgcaggcaccatgg
atgcgcgtggtcatcgtgaccgctcattcggcggtggacacagcggttgatgccattcag
gccggcgcggccgattacctggtcaaaccctgcagccctgatcaactgcgactggccacc
gccaagcagcttgaagtcaggcaactgtcggctcgcctggaagcactggaaggcgagatt
cgcaaacccaaggatggtctggattcccacagcccgtcgatgatggcgattctggaaaca
gcccgtcaggtggccgtgaccgacgccaacattctgatcctcggcgagtcgggcaccggt
aagggtgagctggcgcgcgcgattcacggctggagcaaacgcgccaagaagtcctgcgtg
accatcaactgcccgtcgctcactgccgagctgatggaaagcgaattgttcggtcacagc
cgcggggcctttaccggcgccagcgaaagcacgctcggtcgcgttaaccaagcggatggc
ggcaccctgtttctcgacgagatcggcgattttccgcttactttacaacccaagttgctg
cgtttcattcaggacaaggaatacgagcgtgtcggcgacccagtcactcgccgtgccgac
gtacgcatcctcgccgccaccaacctgaacctggaagacatggtgcgcagcggccgtttc
cgcgaagacctgctctatcgcctgaacgtgatcaccctgcacctgcctgccttgcgcgaa
cgcagcgaagatatcctgaccctggcggaccgttttctggcccgcttcgtcaaggaatac
gcgcgtccggcccgcggcttcagcgaagaggcgcgtgcggcactgctcaactaccgctgg
ccgggcaacatccgcgagctgcgcaacgtcatcgaacgggccagcatcatctgtccgcag
gagcgggtggaaatcagccacctgggcatggcggaacaaccggccaacaacgcgcctcgc
gtcggtgctgcgttgagcctggacgagctggaaaaagcccacatcggggccgttctggcg
accagcgacacactcgatcaagcagcgaagacattgggtatcgatgcctcgacgctttat
cgaaaacgcaaacagtacaacctgtga
DBGET
integrated database retrieval system
