Pseudomonas viridiflava: CFBP1590_0408
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Entry
CFBP1590_0408 CDS
T06554
Symbol
davD
Name
(GenBank) Glutarate-semialdehyde dehydrogenase DavD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00250
Alanine, aspartate and glutamate metabolism
pvd00310
Lysine degradation
pvd00350
Tyrosine metabolism
pvd00650
Butanoate metabolism
pvd00760
Nicotinate and nicotinamide metabolism
pvd01100
Metabolic pathways
pvd01120
Microbial metabolism in diverse environments
Module
pvd_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CFBP1590_0408 (davD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CFBP1590_0408 (davD)
00310 Lysine degradation
CFBP1590_0408 (davD)
00350 Tyrosine metabolism
CFBP1590_0408 (davD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CFBP1590_0408 (davD)
Enzymes [BR:
pvd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CFBP1590_0408 (davD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CFBP1590_0408 (davD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CFBP1590_0408 (davD)
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Gene cluster
GFIT
Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
SMS07993
UniProt:
A0A1Y6JI56
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All DBs
Position
I:341013..342455
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AA seq
480 aa
AA seq
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MQLKDSKLFRQQAYINGQWLDADGGQSIKVNNPATNEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERGNKLRRWFELMIENQDDLGLLMTLEQGKPLAEAKGEIAYAASFIEWFA
EEAKRVYGDVIPGHQPDKRLIVLKQPIGVTAAITPWNFPAAMITRKAGPALASGCTMVLK
PASQTPYSALALAELAERAGIPAGVFSVVTGSAGDIGSELTGNPIVRKLSFTGSTDIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAMISKYRNNGQTCVCANRIYVQDA
VYDAFAEKLKVAVGKLKIGNGLEEGITTGPLIDDKAVAKVKEHIADAVSKGAKVLSGGNS
MEGSFFEPTILVNVSKDAAVAKEETFGPLAPLFRFKDEAEVIEMANDTEFGLASYFYAQN
MSRVFRVAEALEYGMVGINTGLISNELAPFGGIKSSGLGREGSKYGIEDYLEIKYLCLSV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaaagattccaaactgttccgccagcaagcctacatcaacggccagtggctg
gatgcggacggtggtcagtcgatcaaggtcaataaccctgcaaccaacgagattctcggg
actgtgccgaagatgggcgcggccgagacgcgtcgtgcgattgaggcggctgacaaggcg
ctgccggcctggcgtgcgttgaccgccaaggagcggggcaacaagttgcgtcgctggttc
gagctgatgatcgagaaccaggacgatctgggtctgttgatgacgctggagcagggcaag
ccgctggccgaggccaagggcgagattgcgtatgccgcttcctttattgagtggttcgcg
gaagaagccaagcgcgtctacggcgatgtgattcccggccaccagccggacaagcgcctg
atcgtgctcaagcagccgattggtgtgacggctgcgattacgccgtggaacttcccggcc
gcgatgatcacccgtaaagccggtcctgcgctggcgtcgggttgcaccatggtgctcaag
cctgcttcgcagaccccttactctgcactggcgctggctgaactggccgagcgtgcgggt
atcccggcgggcgtgttcagcgtcgtgacgggcagcgcgggcgatatcggcagcgagctg
accggcaacccgatcgtgcgcaagctgtccttcacgggctcgaccgacattggtcgtcag
ctgatggccgaatgcgccaaggacatcaagaaagtctcgctggaactgggcggcaatgcg
ccgttcatcgtgttcgacgatgccgacctggataaggcggttgaaggagcgatgatctcc
aaataccgcaacaacggtcagacctgcgtctgcgccaaccgcatctatgtgcaggacgcg
gtgtacgacgcgttcgccgagaagctcaaggttgccgtgggcaagctcaagatcggtaac
ggtctggaagagggcatcaccaccggtccgctgatcgatgacaaggctgtggccaaggtc
aaggaacacattgccgatgccgtgagcaagggcgccaaggtcctgtccggtggcaacagc
atggaaggctcgttcttcgaaccgactattctggtcaacgtgtcgaaagatgccgccgtc
gcgaaggaagaaaccttcggcccgctggcaccgctgttccgcttcaaggatgaagccgaa
gtgatcgaaatggccaacgacaccgagttcggtctggcgtcgtacttctatgctcagaac
atgagccgcgtgttccgtgtggccgaggcgctggagtacggcatggtgggtatcaacacc
ggcctgatctccaacgagctggcgccgttcggcggcatcaagtcctcgggcctgggccgt
gaaggctccaagtacggcatcgaagattatctggaaatcaaatacctctgcctgtcggtc
tga
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