Pseudomonas viridiflava: CFBP1590_0429
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Entry
CFBP1590_0429 CDS
T06554
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00061
Fatty acid biosynthesis
pvd00071
Fatty acid degradation
pvd01100
Metabolic pathways
pvd01212
Fatty acid metabolism
pvd02024
Quorum sensing
pvd04146
Peroxisome
Module
pvd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CFBP1590_0429
00071 Fatty acid degradation
CFBP1590_0429
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CFBP1590_0429
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFBP1590_0429
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvd01004
]
CFBP1590_0429
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvd04147
]
CFBP1590_0429
Enzymes [BR:
pvd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CFBP1590_0429
Lipid biosynthesis proteins [BR:
pvd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CFBP1590_0429
Exosome [BR:
pvd04147
]
Exosomal proteins
Exosomal proteins of breast milk
CFBP1590_0429
Exosomal proteins of breast cancer cells
CFBP1590_0429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
SMS08014
UniProt:
A0A1Y6JE17
LinkDB
All DBs
Position
I:complement(367691..369259)
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AA seq
522 aa
AA seq
DB search
MSANLIAQLRSALQVHGEKVCAVDHGDTTRSLTYRELRQQAFALAAELQHRFQPKMPNDP
VVIGIVTRNSSQWLIADLACLFAGITSLPLPLAFSQVQAENLAAHCDGFLVDSAGQKTLT
ERWLLDLPASKVRHLDSPAIPQPLAQTAVEHDWICKIIHTSGTTSSPKGVRLSCAAIGQV
LNSLRFRMPANAHLRYLSLVPLSLLLEQVTASYLPLLAGGTIHFLPPNEPLLGEPGASPA
RLTDWIQRVKPTALTVPPVMLNEFLRRLQEDREIARSLATYLTEQVHITCGGAAVDVEIL
RALEAQGVSVFQGYGLSENASVVSVNTAEQQRLGSVGKPLPHVQVRIGLDKTIEVKSTSL
FSGYSGTDPSACAMSADGWMDTGDLGALDSDGYLYVHGRKKNVICLANGRNVSPEQVELE
YRKYDGVRDAAVFLDEDHGLIALLCVESQPDRSDLAQWSTKRFSDVERPSKLWLLDLANP
LLEQLYTVTGRPRRAEIAEAFAHRFSPSMQRTSADEHACLSL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaatctgattgcccagttgcgctccgccctgcaggttcacggcgagaaagtc
tgcgcggtggaccatggcgacaccaccagatccctcacctaccgcgaactgcgccaacag
gcatttgccctggctgcagagttgcagcaccgattccagccgaagatgccgaacgatccg
gtggtgatcggcatcgtcacgcgcaactccagtcagtggctgatcgccgatctggcgtgt
ctgttcgcaggcataacttctttgccgctgcccctggccttcagtcaggtccaggcagaa
aacctggcagcgcattgcgacggttttctcgtggactcggccggtcagaaaacgctcacc
gagcgctggcttctggacctgcccgccagcaaggtccggcatctggactcaccggccata
ccccagccactggcacagacagctgtcgagcacgactggatctgcaagatcattcatacc
tcaggtaccaccagcagtcccaaaggcgttcgactgtcctgcgccgcgattggccaggtg
ctgaactcgctgcgtttcagaatgccggccaacgcccacctccgttacctgtcgctggtg
cccttgagcctgctgctggaacaggtcactgcctcctatctgccgcttctggcaggcggc
acgattcattttctgccgcccaatgagccgttgctgggcgaaccgggcgcatcgcctgcg
cgcctgaccgactggattcaacgggtgaaacccaccgcgctgacggtgccgccggtcatg
ctcaacgagtttctgcgcaggctccaggaagaccgggagatcgctcggagtctggccact
tacctcaccgaacaggtgcacatcacctgcggcggtgcagcggtcgatgtcgagatcctg
cgcgcccttgaagcacagggtgtgtcggtcttccagggctacgggctgtccgaaaatgct
tcggtggtgagcgtgaacactgccgaacagcaacgcctgggcagcgtgggcaagccgttg
ccgcacgttcaggttcgcatcggcctcgacaagaccatcgaagtcaaaagcacgtcgctg
ttcagcggttattccggcacggacccgagcgcctgtgccatgagtgccgatggctggatg
gacaccggcgacctgggtgcactggacagtgacggttatctgtatgtccacggtcgcaag
aagaatgtgatctgcctggccaacggccgcaacgtgagcccggagcaggttgaactggaa
taccgcaaatacgacggcgttcgcgacgcagcggtttttctggacgaagaccacggcctg
atcgccctgctgtgcgtagagtcgcagccggatcgcagcgacctggcgcagtggtcgacc
aaacgtttctccgacgtggaacgccccagcaagctctggctgctggacctcgccaatccc
ctgcttgaacagctgtacaccgtgaccggtcgccccagacgcgccgagattgccgaagcg
ttcgcgcaccgtttttctccatccatgcaaaggacttctgccgatgaacatgcctgcctc
tcgctctga
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