Pseudomonas viridiflava: CFBP1590_0473
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Entry
CFBP1590_0473 CDS
T06554
Symbol
rsmE
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
pvd
Pseudomonas viridiflava
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvd03009
]
CFBP1590_0473 (rsmE)
Enzymes [BR:
pvd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
CFBP1590_0473 (rsmE)
Ribosome biogenesis [BR:
pvd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CFBP1590_0473 (rsmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
CYNS_N
ProQ_C
Motif
Other DBs
NCBI-ProteinID:
SMS08058
LinkDB
All DBs
Position
I:complement(407951..408670)
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AA seq
239 aa
AA seq
DB search
MRLSRFFTDTPLSLGEHELPEAQAHYISRVLRMTEGDALQLFDGSGSEFRGTLLEVGKKR
VRVQLDECFAGQVESGLRIHLGQGLSRGERMDWAIQKATELGVSEITPIVSERCEVRLKD
ERAEKRQMHWQQIAISACEQCGRSVVPVIHPPMPLAEWLKQTEADLKLVLHPVAEPLTSH
EKPASLAFLIGPEGGLNDAEVDQAQTAGFHAARLGPRVLRTETAPVVALSVAQQLWGDF
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagactgtcccgcttcttcaccgacacgccgctgagcctgggcgaacacgaattgccc
gaagcacaggcgcattacatcagccgcgtgctgcgcatgaccgaaggcgatgcgctgcaa
ctgttcgatggctccggcagcgagtttcgcggcaccttgctggaagtcggcaagaagcgc
gtgcgcgtgcaactggatgaatgctttgccgggcaggtcgagtccggtctgcgtatccat
ctgggtcagggtctgtcgcgtggcgagcgaatggactgggcgattcagaaggcgaccgaa
ctgggcgtcagcgaaatcactccgatcgtcagcgagcgctgcgaagtacgcttaaaggat
gagcgcgctgaaaaacgccagatgcattggcaacagattgcgatcagcgcctgcgaacaa
tgcggccgctcggtggtgcctgtgattcatccaccgatgccgctggccgagtggctgaaa
cagaccgaagcagacctgaaactggtcctgcacccggttgccgagccactgaccagccat
gaaaaaccggccagcctggccttcctgatcggcccggaaggcggattgaacgacgccgaa
gtcgatcaggcccagaccgccggcttccacgccgcccgcctcggcccacgcgtgctgcgc
accgaaaccgcccccgtcgtcgcgctcagcgtggcgcagcagctgtggggtgatttttag
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