KEGG   Pseudomonas viridiflava: CFBP1590__1339
Entry
CFBP1590__1339    CDS       T06554                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pvd  Pseudomonas viridiflava
Pathway
pvd03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pvd00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CFBP1590__1339 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvd03019]
    CFBP1590__1339 (rnc)
   03009 Ribosome biogenesis [BR:pvd03009]
    CFBP1590__1339 (rnc)
   03036 Chromosome and associated proteins [BR:pvd03036]
    CFBP1590__1339 (rnc)
Enzymes [BR:pvd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CFBP1590__1339 (rnc)
Messenger RNA biogenesis [BR:pvd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CFBP1590__1339 (rnc)
Ribosome biogenesis [BR:pvd03009]
 Eukaryotic type
  90S particles
   RNase
    CFBP1590__1339 (rnc)
 Prokaryotic type
  rRNA processing factors
   CFBP1590__1339 (rnc)
Chromosome and associated proteins [BR:pvd03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CFBP1590__1339 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase MmeI_N DSRM_2
Other DBs
NCBI-ProteinID: SMS08925
UniProt: A0A1Y6JG23
LinkDB
Position
I:1360982..1361659
AA seq 225 aa
MSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQARE
GQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIYL
DAGMDAARERVLAWLTTEFDSLTLVDTNKDPKTRLQEFLQSRACDLPRYEVVDIQGEPHC
RTFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq 678 nt   +upstreamnt  +downstreamnt
ttgagccgccttgagcgtcagctcggctacaccttcaaggatcaggaactgatggtcctg
gccctgacccaccgcagttttgccggtcgtaacaacgagcgtctggaattcctcggtgat
gccattctcaactttgtggccggcgaggcgctgttcgagcgctttcctcaggcccgtgaa
ggtcagctgtcgcgtctgcgtgcacggttggtgaaaggcgagacgctggcgttgctggct
cgcggttttgatctgggtgaatacctgcgattgggatccggtgaattgaagagcggcgga
ttccgtcgtgaatcgattctggccgatgccctcgaagcgctgatcggtgcgatctacctc
gacgccggtatggacgctgcgcgtgagcgtgtactggcgtggttgacgaccgagttcgac
agcctgacgctggtagacaccaacaaggacccgaaaacccgtctgcaggaatttctgcag
tcacgggcctgtgatctgccacgttacgaagtggtggacatccagggtgagccgcattgc
cggacgttcttcgtcgaatgcgaaatcaccttattgaatgaaaagagtcgaggtcagggt
gtcagccgccggattgccgaacaggtagccgcagctgcagcactcattgcccttggcgtg
gagaatggtcatgactga

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