KEGG   Pseudomonas viridiflava: CFBP1590__1416
Entry
CFBP1590__1416    CDS       T06554                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pvd  Pseudomonas viridiflava
Brite
KEGG Orthology (KO) [BR:pvd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvd03400]
    CFBP1590__1416
Enzymes [BR:pvd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CFBP1590__1416
    5.6.2.6  RNA 3'-5' helicase
     CFBP1590__1416
DNA repair and recombination proteins [BR:pvd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CFBP1590__1416
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: SMS09002
UniProt: A0A1Y6JJH5
LinkDB
Position
I:complement(1442676..1445165)
AA seq 829 aa
MSRPNDFAQRWFRARGWKAFAFQKEVWAAVKQGESGLLHASTGSGKTYAVWFAALNRFAT
TKTPPEDKPRKKKPPAAPLSVMWITPMRALAADTARALEAPLAELDINWSVGLRTGDTSS
SERARQGRRLPSALITTPESLTLLLTRADAQPTLSTLRMVVVDEWHELIGNKRGVQLQLA
LARLRQWNPQLIVWGISATLGNQQHAQEVLLGEGGVTVQGKVVKQLQVDTLLPRSIERFP
WAGHMGLRMLPQVVAEVEKSASCLLFTNTRAQSEIWYQALLEARPDWAGLIALHHGSLAR
EVRDWVERALKEGSLKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPG
RPSRVTLVPTHSLELVEAAAAHDAVAARMIEPRESPHQPLDVLVQHLVSVALGGGFVPDE
LLAEVRTAWAYRDLSDEQWQWALAFVRNGGHSLTAYPDYRRAEPDEHGIWRVPDARLARR
HRMSVGTIVSDATINLKYWKKGGGGGSLGSVEEGFIARLKPGDGFLFAGRLLELVRVENM
TAYVKRATGKKAAVPRWNGGRMPLSSELADAVVEKFDAAAHGRFESPEMQAVKPLLEVQR
QWSGLPQHDTLLAETLKSREGWHLFLYPFAGRHVHLGLASLLAWRLSRHQPLTFSIAVND
YGLELLSASELDWAQVLDDDLFSEVDLMADIIASLNAGELALRRFREIARISGLVFSGYP
GAAKSNRQLQASSGLFFEVFKQYDAGNMLLTQAEQEVLRQELDLVRLEETLRQINSRRLD
LHTIKRATPLAFPLLVERFRESLSSEKLADRIARMVRDLEKAAGPEPER
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgagcagacccaacgatttcgctcagcgatggtttcgggcccgaggctggaaggcgttc
gcgtttcaaaaggaagtctgggcagccgtgaaacagggcgagtccggcctgttgcatgcc
agcaccggctcgggcaagacttatgcggtgtggttcgcagcccttaaccgctttgccacc
accaaaaccccgcccgaagacaaaccccgcaagaaaaagccacccgccgcgccattgagc
gtcatgtggatcacgcctatgcgcgccctcgccgcagacaccgcacgcgcactggaagct
ccgttggccgagctggacatcaactggtctgtgggcctgcgcactggcgataccagcagc
agcgagcgagcccggcaaggacgtcgtctgccatcggcactgattaccacgcctgaaagc
ctgaccctgctgctgacccgcgccgatgcccagccgacgctttccacgttgcgcatggtt
gtcgtcgacgagtggcatgaactcatcggcaacaagcgcggcgttcagctgcaactggcg
ctcgcccgtttgcgccaatggaatccgcaactgatcgtgtggggcatttcggccacgctc
ggtaatcagcagcacgcacaggaggtgttgctgggcgaaggcggcgtcacggttcaaggc
aaagtcgtcaaacagctgcaggtcgatacgctcctgccgcgttccattgaacgctttccg
tgggccggacacatgggcctgcgcatgctgccgcaggtagttgcagaagtagagaaaagc
gccagttgcctgctgttcaccaacactcgcgcacagtcagaaatctggtatcaggcgttg
ctcgaagcgcgcccggactgggcaggactgatcgccctgcatcatggctcattggcccgc
gaagtacgcgactgggtagaacgggcattgaaggaaggctcgctcaaggccgtggtctgc
acctccagtctggatctgggtgtggatttcctgcccgtggagcgcgtgctgcagatcggt
tcccccaagggcgtcgcacgtctgatgcaacgtgccggtcgctcgggtcacgcacctggc
cgcccttcacgcgttacgctggtgccgacccacagccttgaactggtggaagcggccgcc
gcccacgacgccgtagcggcccgcatgatcgagccaagagagtcgcctcaccaaccgttg
gatgtgctggtgcagcatctagtcagcgtggcgctgggcggaggctttgtgccggatgag
ctgttggcggaagtgcgcacagcctgggcgtaccgggacctgagcgacgaacagtggcaa
tgggcactggccttcgttcgcaatggcggccactcactcaccgcctaccccgactaccgc
cgcgccgagccggacgaacacggcatctggcgcgtgcccgatgcgcgactcgcgcgtcgc
caccggatgagcgtcggcaccatcgtcagcgatgccacaatcaacctcaaatactggaag
aaaggtggcggcggcggttcgcttggcagcgtcgaagaaggcttcatcgcccgcctcaag
cccggcgatggctttctgttcgcaggtcggctgctggagctggtcagggtcgagaacatg
accgcctacgtaaaacgcgccaccggcaagaaagccgccgtgccgcgctggaatggcggg
cgtatgccgctgtccagcgagctggcggacgctgtggtggagaaattcgacgctgccgcg
catggccgtttcgaaagtcccgagatgcaggccgtcaaaccactgctggaagtgcagcgc
cagtggtccggattgccgcaacacgacacgctgctggccgagacgctcaagtcccgcgag
ggctggcatctgtttctctatccgttcgccgggcgccatgtgcacctggggctggcgagc
ctgctggcctggcgtctgagccgacaccagccgctgacgttttcgatagccgtcaatgat
tacgggctggaactgctgagtgccagcgagcttgattgggcgcaggtgctcgatgacgat
ctgttttcggaagtcgatctgatggctgacatcatcgccagcctcaacgcgggcgaactg
gcgctgagacgctttcgggaaatcgctcgcatctcgggcctggtgttttcaggctatccc
ggcgcggccaagagcaaccgtcaattgcaggcctccagcgggctgtttttcgaggtcttc
aaacagtacgacgccggcaacatgctgctgactcaagcggagcaggaagtgctgcgccag
gagctggatctggtccggctggaagagaccctgcgccagatcaacagccgcaggctcgat
ctgcatacgatcaagcgtgccaccccgctggcgtttccgttgctggtggagcgctttcgc
gaaagcctcagctcggaaaaactggccgaccgcattgctcgcatggtgcgcgacctcgaa
aaagccgcagggccggagcctgaacgatga

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