Pseudomonas viridiflava: CFBP1590__2341
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Entry
CFBP1590__2341 CDS
T06554
Name
(GenBank) oligogalacturonate-specific porin protein KdgM
KO
K22110
oligogalacturonate-specific porin family protein
Organism
pvd
Pseudomonas viridiflava
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvd02000
]
CFBP1590__2341
Transporters [BR:
pvd02000
]
Other transporters
Pores ion channels [TC:
1
]
CFBP1590__2341
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KdgM
OMP_b-brl
Porin_2
DUF2490
Cwp6_N
Opacity
Motif
Other DBs
NCBI-ProteinID:
SMS09927
UniProt:
A0A1Y6JJ00
LinkDB
All DBs
Position
I:complement(2489587..2490309)
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AA seq
240 aa
AA seq
DB search
MKKSFALLSLAALFPSAWTHADSAYINYRHQYAESTRMHADRVKFGTRLDSGWGFEGELK
YKTAGDRQDVAFDNTVGNGHELTVSYQHKLNDKWLLTPSLALESIERSTAYKMGLKVGYK
VTDQLTLSGRYRYDSIKLDRDRVNRDMPDNEMNDQSVNRYDVWVNYATKGPWSYEYQFTY
FDADYIRYDNDKTDYEQNAAFKYKWDKNWVPFFEVGDIKVNSEDDKRQLRLRVGVQYNFL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcattcgctttgctctccctggccgccctgttcccaagcgcatggacccat
gccgacagcgcctacatcaactatcgccaccaatacgcagaaagcacccgcatgcacgcc
gaccgggtcaagttcggcacgcggctggacagcggctggggctttgaaggtgaactgaag
tacaaaacggcgggtgatcgccaggacgtcgcgttcgacaacaccgtcggcaacggccac
gaactgacggtgagttatcagcacaagctcaatgacaaatggctgctgaccccttccctc
gcactggagagcatcgagcgctccacggcctacaagatggggctgaaggtcggctacaag
gtcaccgatcaactcacgctttccggtcgctaccggtatgactcgatcaagctggaccgc
gacagggtcaaccgcgacatgccggacaatgaaatgaacgatcagtccgtcaaccgctac
gacgtctgggtcaactacgcgaccaaaggcccctggtcatacgagtaccagttcacctac
ttcgacgccgactacatccgctacgacaacgacaagaccgactacgaacagaatgcggcc
ttcaagtacaaatgggacaagaactgggtgccgtttttcgaagtcggcgacatcaaggtc
aactccgaggacgacaagcgccagctgagattgcgggtgggcgtgcagtacaactttctt
tga
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