Pseudomonas viridiflava: CFBP1590__2403
Help
Entry
CFBP1590__2403 CDS
T06554
Symbol
pel
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00040
Pentose and glucuronate interconversions
pvd01100
Metabolic pathways
pvd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CFBP1590__2403 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFBP1590__2403 (pel)
Enzymes [BR:
pvd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CFBP1590__2403 (pel)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
SMS09989
UniProt:
Q4JRB8
LinkDB
All DBs
Position
I:complement(2579956..2581095)
Genome browser
AA seq
379 aa
AA seq
DB search
MVKSRNNLPIKLASGLFGSLMLVSLSAHADIATDVATTGWATQNGGTKGGSRAAAKDIFT
VKNAAELKSALAASVGSNGRIIKITGLIDVSEGKAYTKTSDMKVRGRLDIPGKTTIVGTS
SSAEIREGFFYAKENDVIIRNLTIENPWDPEPIWDADDGSAGNWNSEYDSLTVEGANNVW
VDHVTFTDGRRTDDQNGTANGRPKQHHDGAMDVKNGANYVTISYSIFKNHEKNNLIGSSD
SKTTDDGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSHKIYPFTYAHGMGKS
SKIFSEQNAFEISGISGCDKIAADYGGSTYRDSGSRLNGTALSCPWSTSIGWTPPYSYSP
LSADKVAADVKAKAGAGKI
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggttaagtctcgaaacaatctgccaatcaaacttgccagcggtctcttcggttcgctg
atgctcgtcagtctttctgctcatgccgatatcgcaaccgatgtagccaccaccggctgg
gccacccagaacggcggcaccaaaggcggctcacgggctgctgcgaaggacatcttcacc
gtcaagaacgctgctgaactgaaaagcgcgctggccgcctcggtgggcagcaacggccgc
atcatcaagatcaccggcctgatcgatgtcagcgaaggcaaggcgtacaccaagacctcg
gacatgaaagtccggggccgcctggacatccccggcaagaccaccatcgtgggtaccagc
agcagtgcagaaatccgtgagggtttcttctacgccaaggaaaacgatgtgatcatccgc
aacctgaccatcgagaacccgtgggatccggagccgatctgggacgccgatgacggcagc
gcgggcaactggaactccgagtacgacagcctgaccgtcgaaggtgccaacaacgtgtgg
gtcgaccacgtaacctttaccgacggccgccgcaccgatgatcagaacggcactgccaac
ggtcgccccaagcagcatcacgacggtgccatggacgtgaagaacggcgccaactacgtg
accatctcgtattcgatcttcaagaaccacgagaagaacaacctgatcggttcgagcgac
agcaagaccaccgacgatggcaagctcaaggtcacgatccacaacacgctgttcgaaaac
atctccgctcgcgcaccgcgtgtgcgcttcggccaagtgcacctgtacaacaactaccac
gtgggcagcaccagccacaaaatctaccccttcacctacgcgcatggcatgggcaagagt
tcgaagattttctctgagcagaacgccttcgaaatcagcggcatcagcggctgcgacaag
attgccgccgactacggcggaagcacctaccgtgacagcggctcgcgcctgaatggcaca
gccctgagctgcccgtggagcaccagcatcggctggaccccgccttacagctatagcccg
ctgagcgccgacaaggtggctgcggacgtcaaggccaaggctggcgcaggcaaaatctga
DBGET
integrated database retrieval system
