Pseudomonas viridiflava: CFBP1590__3069 Help Entry CFBP1590__3069    CDS       T06554                                  Name (GenBank) ClpB protein   KO K11907   type VI secretion system protein VasG Organism pvd  Pseudomonas viridiflava Pathway pvd02025   Biofilm formation - Pseudomonas aeruginosa pvd03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:pvd00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     CFBP1590__3069  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     CFBP1590__3069  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:pvd02044]     CFBP1590__3069 Secretion system [BR:pvd02044]  Type VI secretion system   Imp/Vas secretion system core components    CFBP1590__3069 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA AAA_5 NBD_SMAX1 AAA_22 ClpB_D2-small AAA_16 Clp_N nSTAND3 TniB NACHT Sigma54_activat AAA_25 ResIII AAA_7 AAA_29 AAA_24 AAA_6 Motif Other DBs NCBI-ProteinID:  SMS10655 UniProt:  A0A1Y6JL28 LinkDB All DBs Position I:complement(3379700..3382312) Genome browser AA seq 870 aa AA seqDB search MINVDLQQLVNALDAPTRMSLESCAARCVARGGSRILVEDLLLALLEHPHSLLSRALLDA DVDAAHFAALLQPAMEHSASRNPVFAPELVQWLQDALLVANLELGQSHIEQAALVLALLR NPIRYAGSRYQPLLGKINADRLKDFSLAEHRACEGQKPENADESLLERFTHNLTQQAREG RIDPVLCRDEAIRQMIDILSRRRKNNPIVVGEAGVGKTAIVEGLALRIVQGEVPESLKDV ELLTLDMGLLQAGASIKGEFERRLNGVIEEVKASVRSVILFIDEAHTLIGAGGQSGGSDA ANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVRLLEPTVGEAIAILRGLAS AYEKSHGVYLRDDAVVAAARLSARYLTGRQLPDKAVDLLDTACARVRISLAAAPQRLERL RTRYAEDQRQLDAMRRDAQAGLGVDERVLLTLEEGLQELQRQISEVEAVWNQQRTDVEQL LRLRGQLSALRAQHDLAANTDTERYTELFALIESLETELADVHQTLTEATERLVSFEVCP RLIAEVVSAWTGVPLSQLALEHSSKVAGFAEDLKKRIRGQDQAVCALDRAMRAAAAGLNK PDAPAGVYLLAGPSGVGKTETAIALADLLYGGERFLTVINMSEFQEKHTVSRLIGAPPGY VGYGEGGLLTEAVRQKPYSVILLDEVEKADPDVMNLFYQIFDKGIANDGEGREIDFRNTL ILMTSNLGSELITTCCQSGQRPDVEQLEARIRPILTAHFKPALLARMHVVPYYPVTGETL RELIELKLLRLAGRLKIRGLSFAHSEPLVSFLLERCSQGDTGARFVDRLLDTCLIPLIAN RLIDAMSDGQDVQRVYATLDAAGLVICEFD NT seq 2613 nt NT seq  +upstreamnt  +downstreamnt atgatcaatgtagacctgcaacaactggtcaatgcgctggacgcgcccacccggatgagt ctggagagttgcgcagcgcgctgcgtggcgagaggaggcagcaggattcttgtggaggat ctgctgctggcacttctggagcacccccacagtcttctttcccgagcgctgttggatgct gatgtcgacgccgcgcattttgcggcgctgttgcagccggccatggaacacagcgcctct cgtaatccggtgtttgctcccgaacttgtccagtggctacaggacgcgttgctggtggcc aatcttgaactgggccagagccacattgaacaggcggcgctcgttcttgcactgttgcgc aatccgattcgctacgctggcagccggtatcagccgctgctgggcaagatcaatgcggac cgattgaaggatttctctctcgccgagcaccgagcctgtgaaggacaaaagccggaaaac gcagatgaatcgctgctggaacgcttcacgcacaatctgacacaacaggctcgggaaggc cgaattgaccctgtcctgtgccgcgatgaagcgatccggcagatgattgacatcctttcc cggcgacgcaagaacaatccgatcgtggtgggcgaagccggggttggtaagaccgctatt gttgaaggcctggcgctgagaatagttcagggtgaagtgcctgagtctctcaaggatgtc gaactgctgacactggatatgggcctgctgcaggccggggcgagcatcaagggcgagttc gagcgtcgtctgaacggagtgatcgaagaggtcaaggcatccgtgcgcagcgtcattctg tttatcgatgaagctcacacattgatcggcgcaggaggacagtcgggcgggtccgatgcc gccaacctgctgaagccggcgctggcccggggagagcttcggacaatcgctgcgaccacc tggtcggaatacaagaagtacttcgaaaaggatccagctctggcccggcgtttccagcct gttcgcctgctggagcctactgtgggagaagcaatagccattcttcgcggcctggcttcg gcctatgagaaaagccacggtgtctatttgcgcgatgacgctgtagtggctgcggcccgc ttatcggcgcgttatctcactgggcggcagttaccggacaaggcagttgatctgcttgat accgcctgcgcccgtgttcgcatcagcctggcggccgcaccgcagcgactggagcgcttg cgtacccgctacgccgaggatcaacggcaactcgacgccatgcggcgcgacgcacaggcg ggtctgggcgttgatgaacgggttctgctgactcttgaagaaggtcttcaggaactgcag aggcaaataagcgaagtcgaagccgtatggaaccagcagcgcaccgatgtcgagcagttg ctcaggctacgcgggcaattatcagcgctgcgcgcgcagcacgacctggcggcaaatacc gataccgagcggtatacggagctgttcgcactcatcgagtcgctggaaacagaactggcc gacgttcatcaaacgttgactgaagcaacagagcgactggtcagttttgaggtgtgtccc cgattgatcgcagaggtggtcagcgcctggactggcgttccgctttcacagcttgcactg gagcacagttccaaagttgccggtttcgcggaggacctgaaaaaacgcattcgtggccag gatcaggctgtttgtgcgcttgaccgagcgatgcgcgcggcggcggcggggctgaacaag ccggatgcaccggcaggtgtctatcttctggcaggccccagcggcgtgggcaagaccgaa acagccattgcgctggctgacttgttgtatggcggcgagcgttttctcacggtcatcaac atgtccgaatttcaagagaaacatacggtttcccgcctgataggcgcgccgcccggttat gtcggatacggggagggcggtctgctcaccgaggctgtccggcaaaagccctattcggtc attctgctggatgaagtagagaaggccgatcccgatgtgatgaatctgttttatcagata tttgataagggcattgccaatgatggcgaggggcgagagatcgactttcgcaatacgctt attctcatgacatccaatcttggaagcgaacttatcacgacgtgctgccagtcaggtcaa cgacctgatgtcgagcaactggaagcacgcattcgcccgattctgactgcgcatttcaag cctgcactgctagcgaggatgcacgtcgtgccgtattaccccgtcactggagaaacactg cgcgaactgatcgagcttaaacttctgcgtttggcaggcaggttgaaaatccggggactc agcttcgcgcattcagagcctctcgtctctttcctgcttgaacggtgctcgcaaggtgat acaggggcgaggttcgttgatcgcttgctggacacttgccttattccgttgattgccaat cgcctgatcgacgccatgtcagacggtcaggatgtccagcgcgtttacgcgacactggat gctgcgggtcttgtcatttgcgagttcgactga

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