Pseudomonas viridiflava: CFBP1590__3070
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Entry
CFBP1590__3070 CDS
T06554
Name
(GenBank) type VI secretion protein
KO
K11895
type VI secretion system protein ImpH
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CFBP1590__3070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvd02044
]
CFBP1590__3070
Secretion system [BR:
pvd02044
]
Type VI secretion system
Imp/Vas secretion system core components
CFBP1590__3070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
Motif
Other DBs
NCBI-ProteinID:
SMS10656
UniProt:
A0A1Y6JL44
LinkDB
All DBs
Position
I:complement(3382325..3383329)
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AA seq
334 aa
AA seq
DB search
MDTSHGAPAASLVALSHTIREHSIYQAIPQILKLLREVHPNADDESLHDFLLLKANPGFG
FPGSDIECLELFEARGKLHVRLCLNVISLVGSGSPLPAFYAEQVLDEDNSSATRDFLDVF
HHRLQKLMVPVWRKYRYHAVFAEGATDRFSEYLFALIGLGGARVREAAELDWKRLLPYLG
LLSLRAHSAALIESVLRYYFKHADFFIEQCAERVVHISPEQRNFLGKANSQLGHDAVLGE
RIRDRSGKFRIHIRQLCWDSFHQFLPQGAWNQPLGALVRFTQRDFLEYDICLVLLREEIR
ALRIGAQNTCRLGWTSWLGRERADGVVTLGQSIH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggacacctcgcatggggcaccagccgcttctttagttgcactcagtcatacgatccgt
gagcactccatttatcaggcgatccctcagatccttaagctgcttcgcgaggttcatccg
aacgctgatgatgagtcgctgcatgactttcttttgctcaaggcaaacccgggtttcggc
tttcctggaagcgatatcgaatgtctggagctgtttgaagcgcgcgggaaattgcacgta
aggctgtgcctgaatgtcatcagccttgttggatccggctcccccttgccagccttttac
gctgagcaggtcttggatgaggataactcgagcgcaacgcgtgattttcttgatgttttt
catcaccgtttgcagaagctaatggtgcccgtctggcgcaaatatcgttaccacgcggtg
ttcgctgagggcgcgacggaccgtttttccgagtatctgtttgcgctgatcggattgggt
ggtgcaagggtcagggaggctgccgagctcgactggaagaggctcctgccttacctgggg
ttactcagtttgcgagcgcactctgcggctctgatcgagtcggttctgcgttattacttc
aagcatgctgatttcttcatcgagcagtgtgccgaacgtgtcgttcacatcagtcctgaa
cagcgcaactttctgggcaaggccaatagtcagctaggccacgatgctgttctgggtgag
cggattcgagaccgaagcggcaagtttcgtatccacatcaggcaattgtgctgggacagc
tttcatcagtttctcccccagggtgcctggaatcagccgctcggtgccttggtgcggttc
acgcaacgagattttcttgagtacgacatatgtcttgtactgctgcgagaggaaatccgg
gctctgcgtatcggggctcagaacacctgccgcctcggctggaccagctggctggggcgt
gagcgtgccgatggtgtggtgacgcttggccagtcgattcattaa
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