Pseudomonas viridiflava: CFBP1590__3074
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Entry
CFBP1590__3074 CDS
T06554
Name
(GenBank) hypothetical protein
KO
K11901
type VI secretion system protein ImpB
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CFBP1590__3074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvd02044
]
CFBP1590__3074
Secretion system [BR:
pvd02044
]
Type VI secretion system
Imp/Vas secretion system core components
CFBP1590__3074
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Sas-5-like_implico
Motif
Other DBs
NCBI-ProteinID:
SMS10660
UniProt:
A0A1Y6JNC5
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All DBs
Position
I:complement(3387098..3387595)
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AA seq
165 aa
AA seq
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MAKEGSVAPKERINVTFKPAIGDAQEEIELPLKLLVLGDFIQRADERKLEDRKSINVDKN
NFDDVLAKQNLRLSLSIPNRLQDEGEAEELAIDVRVNAMTDFNPASLVEQIPELRKLMEL
RDALMALKGPLGNAPAFRKAIENVLADKASRDRVLGELGLDAVTE
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagaaggctctgtcgcgcccaaggaacgtataaatgttactttcaaaccggca
attggtgatgcacaggaagagatagaactccccttaaaactgttggtgttaggtgatttt
attcagcgagctgatgaacgaaagctcgaagaccgcaagtcgattaatgtggataaaaac
aactttgatgatgtgctcgcgaaacagaatctgaggctttcattgagcattcccaatcgt
ctgcaggatgaaggcgaggctgaagagttggcgattgatgtccgcgtcaacgcaatgact
gatttcaacccggccagccttgtagagcaaattccagagctcaggaaactcatggagttg
cgtgacgccttgatggctctcaaggggccgttgggcaatgcgcctgcctttcgcaaggcg
attgaaaatgtgcttgccgacaaggcttcgcgtgatcgagtgcttggcgagttgggactc
gacgctgtaacggaatga
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