Pseudomonas viridiflava: CFBP1590__3109
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Entry
CFBP1590__3109 CDS
T06554
Symbol
mrdA
Name
(GenBank) Penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00550
Peptidoglycan biosynthesis
pvd01100
Metabolic pathways
pvd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFBP1590__3109 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CFBP1590__3109 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pvd01011
]
CFBP1590__3109 (mrdA)
Enzymes [BR:
pvd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CFBP1590__3109 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pvd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CFBP1590__3109 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
MAP
AAA_12
Motif
Other DBs
NCBI-ProteinID:
SMS10695
UniProt:
A0A0D0KY86
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All DBs
Position
I:complement(3423725..3425614)
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AA seq
629 aa
AA seq
DB search
MPEPIPLKDHEKETRLVNQRLIACAILVAVLAGSLIARMYFLQVTEFEYHSTISENNRVH
VLPIPPERGLIYDRNGEVLADNRPSFNLTLTRERAGDWHKVIDELMTLLELPDEDRILFD
KELKQVRHPFEPATLLYELTEEQIAILAVNQYLLPGVDVAAQFVRHYPLGDHFAHSIGYV
GRINEKEASQLDNEYRGTQSIGKTGIERFYESELHGHVGYEEVETNAQGRVLRVLKHTDP
VPGKNITLSLDVHLQEAAEKALGDRRGSVVALDPETGEVLAMVSKPSFDPNLFVTGISFK
QYAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVVNASTKVFDPGYFQLPDFD
HKYRNWNHSGDGWVDMDTAIMRSNDTYFYTLAHKLGIDRLHDYMTMFGIGQKVSLDMFEE
SAGLMPSREWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAQATSLIASKGVWHRPHLA
MDVGHVAPVDEHPMPNIVLHDPREWEQVNEGMQMVMHDPRGIARDAAKGAQYRIAGKSGT
AQVVAIKQGERYNRLKTLERNRDNALFVGFAPAEHPKIVVSVTIENGEAGGRVAGPVVRE
ILDAWLLDNDGKLKPQYAAPTKPAGNPHA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaccgattcctttaaaggaccatgaaaaagagacgcgactggtcaatcagcgc
ctgattgcctgcgccatactggtcgccgtactggctggctccctgatcgcgcggatgtat
ttcctgcaggtcaccgaattcgaataccactcgaccatttccgaaaacaaccgggtgcac
gtgttgccgatcccgcccgagcgcgggctgatttacgaccgcaatggcgaggtcctggcc
gacaaccgccccagcttcaacctgaccctgacccgcgagcgcgccggtgactggcacaag
gttatcgatgaactgatgaccttgctggaactgcccgatgaagaccgcatcctattcgac
aaggaactgaaacaggttcgccatccgttcgagcctgcgacgctgctgtacgaactgacc
gaagagcagattgccattctggccgtcaatcagtacctgctgccgggcgtcgatgtagcc
gcgcagttcgtgcgccattacccgttgggcgaccactttgctcactccatcggctacgtc
gggcgtatcaacgagaaagaagcctcgcaactggacaacgagtatcgcggcacgcaatcc
atcggcaagaccgggatcgagcgcttctacgagtccgaactgcatggccacgtaggctac
gaagaagtcgaaaccaatgcccagggccgcgtgttgcgggtgctgaaacacactgatccg
gtgccgggcaagaacatcaccctgagccttgacgtgcatctgcaggaggctgccgagaaa
gcgctgggtgaccgccgtggttccgtggtggcgctggacccggagacgggcgaggtgctg
gcgatggtcagcaaacccagcttcgaccccaacctgttcgtgaccggtatcagcttcaag
cagtacgccgcactgcgggattccatcgatcggccgctgtttaaccgcgtactgcgtggt
ctgtatgcgccgggctcgacggtcaagccggaagtggcgattgccgggctggacagcggg
gtggtcaatgcctcgaccaaggtcttcgaccccggttatttccagctgccggatttcgat
cacaagtaccgtaactggaaccacagcggcgacggctgggtggacatggacacggcgatc
atgcggtccaacgacacctatttctacacgctggcacacaagctgggcatcgaccgtctg
cacgactacatgaccatgttcggcatcggccagaaggtctcgctggacatgttcgaagag
tcggcgggccttatgccgtctcgcgaatggaagcgcgccacacgccgtcaggcctggttc
ccgggcgagaccgtgattctcggtatcggccagggctacatgcaggtcacgccgttgcaa
ctggctcaggcaacctcgctgatcgccagcaaaggcgtctggcaccgtccgcacctggcg
atggacgtgggccatgtggcaccggtggacgagcacccgatgcccaacatcgtgctgcac
gacccgcgtgagtgggagcaggtcaacgaaggcatgcagatggtcatgcacgacccgcgc
ggtattgcgcgcgatgcagccaagggtgcgcaataccgcatcgcaggcaagagcggcacg
gcgcaggtcgtggcgatcaagcagggcgagcgttacaaccgcctcaagacgctggaacgc
aaccgagacaacgccctgttcgtcggtttcgccccggcagagcatccgaaaatcgtcgta
tcggtgaccatcgaaaacggcgaggcgggtggtcgtgtggcaggccccgtagtccgcgaa
atcctcgacgcctggctgctggacaacgacggcaagctcaaaccgcaatacgccgcaccg
accaagcctgcaggcaatccgcacgcctga
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