Pseudomonas viridiflava: CFBP1590__3149
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Entry
CFBP1590__3149 CDS
T06554
Name
(GenBank) Probable peptide ABC transporter ATP-binding protein y4tR
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFBP1590__3149
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvd02000
]
CFBP1590__3149
Transporters [BR:
pvd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CFBP1590__3149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
Mg_chelatase
nSTAND1
AAA_16
ResIII
CbiA
Motif
Other DBs
NCBI-ProteinID:
SMS10735
UniProt:
A0A1Y6JL99
LinkDB
All DBs
Position
I:3467299..3468300
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AA seq
333 aa
AA seq
DB search
MALLHVENLRVDIPLGQDTLHAVRGLDFQVERGEMLCIVGESGCGKSLTSLALMDLLPRK
ARRTATRLSLDGIDMLGQSERQMCDLRGNRLAMIFQEPMTSLNPAYSIGDQLSEVLTRHR
KVSRKEALLRAAQMLEKVGISNATERLRQYPHQLSGGLRQRVIIAMALMCEPDVIIADEP
TTALDVTIQAQILRLIRDLQKELGLAVIFITHDLGLVARIADRVAVMYAGQIVETAPAVE
LFENPQHPYTRGLLASIPIPGRTQPGQPLGSIPGLVPSLVGEQHGCAFRNRCPQAIPACA
DDVPAINDHDHMTRCLFAAPGAEPVFHREGARS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttgcatgttgaaaacctgcgtgtcgacatccccttggggcaggacacgctg
cacgcggtacgcggcctggactttcaggtcgaacgaggagagatgttgtgcatcgtcggc
gagtcgggctgcggcaaatccctgacctcgctggcgctcatggacctgctgcctcgcaag
gcccggcgcaccgcaacccggctgagtctggacggcatcgacatgctgggccagagcgag
cggcagatgtgcgacctgcgcggcaaccggctggcgatgatctttcaggagcctatgacc
tcgctcaacccggcctacagcattggcgatcagctcagcgaagtgctgacccggcatcgc
aaggtgtcacgcaaggaggccctgctgcgggctgcgcagatgctggaaaaggtcggcatc
agcaacgccaccgaacgcttgcgccagtatccgcatcagctttcgggaggtctgcgtcag
cgggtgatcatcgccatggcgctgatgtgcgaaccggatgtgatcatcgccgacgaaccc
accacggcgctggacgtgaccattcaggcgcagatcctgcggctgatccgcgaccttcag
aaagaactggggctggcggtgatcttcatcacccacgacctgggactggtggcgcgcatt
gccgaccgcgtggcggtgatgtacgccgggcagatcgtcgagaccgcgcctgccgtcgag
ctgttcgaaaacccgcagcatccttatacgcgtggcttgctggcgagcattccgattccg
ggacgcactcaaccgggtcaacccttgggctcgattcccggtctggtgcccagcctcgtt
ggcgagcagcacggttgtgcgtttcgcaaccgctgcccgcaggcgattccagcctgcgcc
gacgacgttccggccatcaacgaccacgaccatatgacccgctgcctgtttgcggcaccg
ggcgcggaaccggtgtttcatcgcgagggcgcacggtcatga
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