Pseudomonas viridiflava: CFBP1590__3270
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Entry
CFBP1590__3270 CDS
T06554
Symbol
serS
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CFBP1590__3270 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvd01007
]
CFBP1590__3270 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvd03016
]
CFBP1590__3270 (serS)
Enzymes [BR:
pvd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CFBP1590__3270 (serS)
Amino acid related enzymes [BR:
pvd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CFBP1590__3270 (serS)
Transfer RNA biogenesis [BR:
pvd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CFBP1590__3270 (serS)
Prokaryotic type
CFBP1590__3270 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Filament
TerB_C
Motif
Other DBs
NCBI-ProteinID:
SMS10856
LinkDB
All DBs
Position
I:complement(3599202..3600482)
Genome browser
AA seq
426 aa
AA seq
DB search
MLDSKLLRTQLQDVADRLASRGFTLDVARIEALEAQRKVVQTRTEQLQAERNARSKSIGQ
AKQRGEDIAPLMADVERMGTELSEGKVELDGIQAELDALVLNIPNLPHESVPVGADEDGN
VEVSTWGTPTRFDFEVKDHVALGEQYGWLDFETAAKLSGARFALLRGPIARLHRALAQFM
INLHINEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSLTN
IVSGEILDAKQLPMKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDESMAA
LESLTGNAERVLQLLELPYRKLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNCGD
FQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPDVLKPYMG
GLEVIG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctcgattccaaactgttacgtactcaacttcaggacgtagcggatcgcctggcttcc
cgtggctttacactggacgtggcccgtattgaagcgctggaagcccagcgcaaggttgtg
cagacccgcaccgaacagttgcaggccgagcgtaacgcccgttccaaatccatcggtcag
gccaagcaacgcggcgaagacattgcgccactgatggcggacgtcgagcgcatgggcacc
gaactgagcgaaggcaaggtcgagctggacggcattcaggccgaactggacgcgctggta
ctcaatatcccgaacctgccacacgaatcggttccggtaggcgccgatgaagacggcaac
gtcgaggtgagcacctggggcacgccaacccgcttcgatttcgaggtcaaggaccacgtc
gcgctgggcgaacaatacggctggctggatttcgaaaccgccgccaagctgtctggcgcg
cgttttgccctgctgcgtggccctatcgcacgtctgcatcgtgcgctggcccagttcatg
atcaacctgcacatcaacgagcatggctacgaagaggcttacacgccttatctggttcag
gcgcctgcgctgcagggcaccggtcaattgccgaagttcgaagaagacctgttcaagatt
tcccgtgaaggcgaagcggatctgtacctgatcccgaccgccgaagtgtcgctgaccaac
atcgtgtctggggagattctggacgccaagcagctgccgatgaagttcgtcgcccacacg
ccatgcttccgcagcgaagcgggcgcgtcgggtcgtgacactcgcggcatgattcgccag
catcagttcgacaaggtcgagatggtgcagatcgttgcgccggacgagtccatggccgcc
cttgaatcgctgaccggcaacgccgaacgcgtgctgcaactgctggagctgccttaccgc
aaactggcgctgtgcaccggcgacatgggtttcagcgccgtgaagacctacgaccttgaa
gtctggattccgagccaggacaagtaccgtgaaatctcctcgtgctccaactgcggggac
ttccaggcgcgtcgcatgcaggctcgctggcgcaacccggaaaccggcaagccggaactg
gtgcatacactgaatggctccggtctcgcggtagggcgtacgctggtcgcggtgctggaa
aactatcagcaggcagacggttcgattcgtgtgcctgacgttctcaagccctacatgggc
ggccttgaggtcatcggttaa
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