Pseudomonas viridiflava: CFBP1590__3349
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Entry
CFBP1590__3349 CDS
T06554
Symbol
ku
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CFBP1590__3349 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvd03400
]
CFBP1590__3349 (ku)
DNA repair and recombination proteins [BR:
pvd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CFBP1590__3349 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
SMS10935
UniProt:
A0A1Y6JLV0
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All DBs
Position
I:complement(3691828..3692763)
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AA seq
311 aa
AA seq
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MARAIWKGAISFGLVHIPVALISATSSKGVDFDWLDKRSMDPVGYKRINKVTGKEVSSEN
IVKGVEYEKDRYVVLSEQEIRAAHPKSTQTIDIFGFVDSQQIPLQNIDTPYFLTPDKRGE
KVYALLRETLHDTKKVALANVVLHTKEHLAAVMPLASALVMVILRWPADVRELDDLDLSD
AVTDVQLNKSERDMAKRLVKDMSADWTPEDYRDTFQDKIMQLVETKAKEGKIQDLETDQG
EEERKSADVIDLTDLLRRSLAGKGGASKSKASKPAAKAKASASESAKSKASATKEPAKRR
APARKKTSKAS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcaagggcaatctggaagggcgcgatcagtttcgggctggtgcatataccggtggca
ctgatttcggcgacatcatcgaaaggtgtcgattttgactggctcgacaagcgcagcatg
gatccggtgggctacaagcgcatcaacaaggtcaccggcaaggaagtgtccagcgagaac
atcgtcaagggcgtcgaatacgagaaagaccgttacgtggtgctcagcgagcaggagatc
cgtgctgcgcatcccaagtccacgcaaaccatcgatatcttcggcttcgtcgacagccag
cagattcccttgcagaacatcgacaccccttactttctgacccccgacaagcgcggcgaa
aaggtctacgccctgctgcgcgagacgttgcacgacaccaaaaaagtagcgctggccaat
gtggtgctgcacaccaaggagcatctggctgccgtcatgccgctggcttcagcgctggtc
atggtgatcctgcgctggcccgccgatgtgcgcgagctcgatgatctggacctgagcgat
gcggtcaccgacgtgcagttgaacaagagcgagcgcgatatggccaagcgtctggtcaag
gacatgagtgccgactggacgccggaagactaccgcgacacctttcaggacaaaatcatg
caactggtcgagaccaaggcaaaagagggcaagatccaggaccttgaaactgatcagggc
gaggaagagcgcaagagcgccgatgtcatcgatctgaccgacctgttgcgccgcagcctc
gcgggcaagggcggcgccagcaaaagcaaggcgagcaaacctgcggccaaggccaaggcg
tcggccagcgaatccgccaagtccaaggcgtccgccaccaaagaacctgccaagcgccgt
gcgccggctcgcaagaaaaccagcaaggcctcctga
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