Pseudomonas viridiflava: CFBP1590__3394
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Entry
CFBP1590__3394 CDS
T06554
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00071
Fatty acid degradation
pvd00280
Valine, leucine and isoleucine degradation
pvd00310
Lysine degradation
pvd00362
Benzoate degradation
pvd00380
Tryptophan metabolism
pvd00410
beta-Alanine metabolism
pvd00640
Propanoate metabolism
pvd00650
Butanoate metabolism
pvd00907
Pinene, camphor and geraniol degradation
pvd00930
Caprolactam degradation
pvd01100
Metabolic pathways
pvd01110
Biosynthesis of secondary metabolites
pvd01120
Microbial metabolism in diverse environments
pvd01200
Carbon metabolism
pvd01212
Fatty acid metabolism
Module
pvd_M00087
beta-Oxidation
pvd_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CFBP1590__3394 (fadB)
00650 Butanoate metabolism
CFBP1590__3394 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CFBP1590__3394 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CFBP1590__3394 (fadB)
00310 Lysine degradation
CFBP1590__3394 (fadB)
00380 Tryptophan metabolism
CFBP1590__3394 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CFBP1590__3394 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CFBP1590__3394 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CFBP1590__3394 (fadB)
00930 Caprolactam degradation
CFBP1590__3394 (fadB)
Enzymes [BR:
pvd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CFBP1590__3394 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CFBP1590__3394 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CFBP1590__3394 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CFBP1590__3394 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
SMS10980
UniProt:
A0A1Y6JP95
LinkDB
All DBs
Position
I:complement(3739715..3741862)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDAVKADASVKGVIVTS
GKDAFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLGVPTVVAINGIALGGGLE
MCLAADYRVMSSTAKIGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGKENAAEDAL
KVGAVDAVVAPEKLQAAALDLIKRAISGEFDFKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAAQSLIGLFLNDQEL
KKKAKGYDEIAKDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGNRVDKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEAQVG
ENTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEANRLGQKNGKGFYAYEMDKKGKP
KKVNDPAVLDVLKPIVFEQREVTDEDIINWMMIPLCMETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADQYAELGALYQPTAKLREMARNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtctcaccctcaacgaactg
cgtcaggcagtggatgctgtcaaggctgacgcgtcggtcaaaggtgtgatcgtcaccagc
ggcaaagacgcattcatcgtcggcgctgacatcaccgagtttgtcgacaacttcaagttg
cccgaagccgaactggtcgccggcaacctggaagccaaccggatcttcagtgatttcgaa
gaccttggcgtgccgacagtcgtcgccatcaacggcatcgcgctaggcggcggtctggaa
atgtgcctggcggccgattaccgcgtcatgtcgagcactgcgaagatcggcctgccggaa
gtcaagctgggtctgtacccgggtttcggcggcacggttcgtctgccgcgcatcatcggt
gccgacaatgccatcgaatggattgcgtccggcaaggaaaacgctgccgaagacgctctc
aaggtcggcgctgtggatgccgtcgttgcacctgaaaaattacaggctgcggcgctggac
ctgatcaagcgcgccatttccggcgagttcgatttcaaggccaagcgtcagcccaagctg
gacaagctcaagctcaacgccatcgagcagatgatggcattcgaaaccgccaagggtttt
gtcgcaggtcaggccggccccaactatccggcaccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcgctggagatcgaagctgcgggtttcgtgaaa
atggccaagacctctgctgcgcagagtctgatcggcctgttcctgaacgatcaggaactg
aaaaagaaagccaagggttacgacgaaatcgcaaaagacgtgaagcaggcggctgtactc
ggcgctggcatcatgggtggcggcatcgcgtaccagtcggcggtcaagggcacgccgatc
ctgatgaaggacattcgtgaagaggcgattcaactgggtctgaacgaagcgtcgaaactg
ctgggtaaccgcgtcgacaagggccgtctgacggctgcgaagatggccgaagcgctcaat
gcgattcgtcctacgctgtcctacggtgacttcggcaacgtcgatctggttgttgaagcc
gtggtcgagaaccccaaggtcaaacaggccgttctggctgaagtcgaagcgcaggtgggt
gaaaacaccattctggcgtcgaacacctcgaccatctcgatcagcctgctggcgaaggcg
ctcaagcgcccggaaaacttcgtgggcatgcacttcttcaatccggtgcacatgatgccg
ctggttgaagtgatccgtggtgagaagtccagcgaagaagcggtggccaccaccgtcgct
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggcttcttggtc
aaccgtgtgctgttcccgtatttcggcggtttcgccaaactcgtcagcgctggcgtcgac
ttcgtgcgcatcgacaaggttatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtagtcggcatcgacaccggccaccacggtcgtgacgtcatggccgaaggcttc
ccggaccgcatgaaggacgaccgtcgttctgccgtcgacgtgctgtacgaagccaatcgc
ctgggtcagaagaacggcaagggcttctacgcctacgagatggacaagaaaggcaagccg
aagaaggtcaacgacccggctgtgctggacgtgctcaagccgatcgttttcgagcagcgt
gaagtcaccgatgaagacatcatcaactggatgatgatcccgctgtgcatggaaaccgtg
cgctgcctggaagacggtatcgttgaaaccgccgccgaagccgacatgggactgatctac
ggtattggtttccctccattccgtggcggtgcgctgcgttacatcgactcgatcggcgtt
gccgaattcgttgccctcgctgaccaatatgccgagctgggtgccttgtatcaaccgacc
gcgaagctgcgtgagatggcccgcaacggccagagcttcttcggttaa
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