Pseudomonas viridiflava: CFBP1590__3498
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Entry
CFBP1590__3498 CDS
T06554
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pvd
Pseudomonas viridiflava
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvd03000
]
CFBP1590__3498
Transcription factors [BR:
pvd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CFBP1590__3498
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like
Motif
Other DBs
NCBI-ProteinID:
SMS11084
UniProt:
A0A1Y6JMS4
LinkDB
All DBs
Position
I:3851892..3852785
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AA seq
297 aa
AA seq
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MKNSIQHIRAFLAVAHSGSFTKAAVELNLSPSALTVQIQQLEEWLGVALLERSPRHVSLT
AAGQNNLQPMEKLLLDLDNIVSGSRDLAALRRGVVTLAALPSMCSSSLPIILREFRTRFP
GIEVRLRDVVAQRIDALVREGEVDFGLGVRARMSHGLEFEGLMVDRLRLFVPAAHPLATR
ASVSLADLAGQPIILTGRDSSVRERVEQLFADEGLALVPGLEANYMSTVLALVRQGLGMT
LLPESADEGRSDTVQVPIDHPGVSREIGLITRTEQTLSPAANRFVEMMREVLTSEAC
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattcgatccagcacatccgggcgttcctggccgtcgctcacagcggcagcttt
accaaggctgcggtggagctgaacctctcgccgtccgcgctgaccgttcagatccagcaa
ctggaagagtggctgggcgttgcgctgctggaacgtagcccacgccacgtcagcctgacg
gcggcgggacagaacaatttgcagcccatggaaaagctgctgttggatctggacaacatc
gtcagcggttcgcgggacctggcggcgttgcgccggggcgtggtgaccctcgccgccctg
ccctcgatgtgctccagctcgctgccgatcatcctgcgcgaattccgcacccggtttccc
ggcatcgaagtgcgcctgcgcgatgttgtggcgcaacgtatcgacgcgctggtgcgtgaa
ggcgaagtcgatttcggactcggcgttcgcgcccggatgagccacgggctggagttcgaa
ggcctgatggtggaccggctgcggctgttcgtccccgccgctcacccgctggccacacga
gcgtcagtcagcctggccgatctggcgggccagccgattattctgaccggacgcgacagc
agcgtgcgcgagcgggtcgagcaattgttcgccgatgaagggcttgctctggtgccgggc
cttgaggccaactacatgtcgaccgtcctggcgctggtgcgccaggggctgggcatgacc
ctgctcccggagtcggccgacgaaggccggtctgacaccgttcaggtgcccatcgaccac
cccggcgtcagccgggaaatcggcctgatcacccgcaccgaacagaccctgagccccgcg
gcgaatcggttcgtggagatgatgagagaggttttgactagcgaggcctgttga
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