Pseudomonas viridiflava: CFBP1590__3536
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Entry
CFBP1590__3536 CDS
T06554
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd03030
DNA replication
pvd03430
Mismatch repair
pvd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFBP1590__3536
03430 Mismatch repair
CFBP1590__3536
03440 Homologous recombination
CFBP1590__3536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvd03032
]
CFBP1590__3536
03400 DNA repair and recombination proteins [BR:
pvd03400
]
CFBP1590__3536
Enzymes [BR:
pvd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFBP1590__3536
DNA replication proteins [BR:
pvd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFBP1590__3536
DNA repair and recombination proteins [BR:
pvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFBP1590__3536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
AAA_18
PIF1
AAA_30
TIP49
AAA_2
AAA_19
TsaE
DUF3646
nSTAND3
AAA_7
Rad17
SKI
Mg_chelatase
Herpes_Helicase
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
SMS11122
UniProt:
A0A1Y6JQL3
LinkDB
All DBs
Position
I:complement(3888332..3890524)
Genome browser
AA seq
730 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGVCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMATDVRAM
LGTLDHGQVFDVLTALLEGDARGVLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADSENAPRQPLKPVGISQATADSQRAVADATPVASVASQPPVMAAPDPAFEATVPAPEPA
PVKAAQVKPEPEQAQPAPPAPAEEIDLPWNEPKTPVADVIPEPVAEPAEAPVAEPVLETL
GEQPDLTPMPTPAPASPVPDAPQVEEQQVQEQPAEEPQPVAEQAVTPTMLEAIPDVAYLS
APMDRDDEPPPDDDYVEPDVDIDPASYAYLDELAHESVGDAEPVEPEPTPAAMPATGLAL
EWLEMFPGLPISGMTGSIAANCTLMGKEGDHWLLHLDPAHSALFNSTQQRRLNDALNQFT
GRTINLSIELIKPEQETPAQAASRLRAERQRQAEASIHADPFIQQMLQQFGAMIREDTIK
PVDAPAAQTQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacacatgtgttgaaggccctgatcaacgcgctcgacagccagcgcctgcaccacgcc
tatctgttcaccggcacgcgcggtgtgggcaagaccaccatcgcgcgcatcattgccaaa
tgcctgaactgcgaaaccggcattacctcaacgccttgcggcgtctgttcggtgtgcaag
gagatcgatgagggtcgtttcgtcgacctgatcgagatcgacgccgccagccgtaccaag
gtcgaagacacccgtgaattgctcgacaacgtgcagtacgcgccgagtcgcggacgcttc
aaggtctacctgatcgacgaagtgcacatgctgtccagccactcgttcaacgccttgctc
aagacgcttgaagagccgccgccctacgtcaagttcatcctggcgacgaccgatccgcag
aagctgcccgcgaccattctgtcgcgctgcctgcagttttccctgaagaacatgacgccg
gaacgtgtggtcgagcatttgacccacgtgctgggtgtcgagaacgtgccgttcgaagac
gacgcgctgtggttgctgggccgcgccgccgatggttcgatgcgcgacgccatgagcctg
accgatcaggcgattgccttcggtgaaggcaaggtcatggctaccgatgtgcgcgccatg
cttggcacgctggaccatggtcaggtgttcgatgtgctgaccgcgttgctggaaggcgat
gcacgtggcgtgcttgaagccgtgcgccatctggccgagcaggggcctgactggaacggt
gtgctctcggaaattcttaacgtgctgcaccgcgtggcgattgcccaggcgctgcccgag
ggtgtcgacaacggtcacggcgaccgtgatcgcgtcctcgctctggcgcaggcgctgccg
gccgaagacgtgcaattctattatcagatgggcctgatcggccgacgtgacctgcctctg
gcgcccgacccgcgtggcggttttgagatggtgctgctgcgcatgctggcgttccggccg
gccgatagcgagaacgcgccgaggcagccgctaaagccggtggggatcagccaggccacg
gctgattcccaaagggcagtggccgatgcgacacctgttgcatcggtggcttcccaaccg
cctgtgatggcagcgcccgatcccgcctttgaagcgacggtgcccgcgcctgaaccggct
ccggtcaaagctgcgcaggtgaagcctgagcctgaacaggctcaacccgcgccgccagcg
cctgccgaagaaatcgatctgccctggaacgaaccgaaaacgcccgttgccgatgtaata
cctgagcctgtcgccgagcccgccgaagcgccggttgccgaacccgttctggaaaccctc
ggcgaacagcctgatctgacgcccatgccgacgcctgcgcccgcaagtcccgtaccggac
gcgccgcaggtcgaggaacaacaggtgcaggaacagcctgccgaagaaccccagccggtt
gccgagcaggctgtcactccgaccatgctcgaagccattccggatgtggcgtatctgtca
gctccgatggaccgcgacgacgagccgccaccggacgatgactatgttgagccggatgtg
gacatcgaccctgcgtcctacgcttacctggacgagctggcgcatgagagcgtcggtgac
gccgaaccggtcgaacccgagccgacgcctgccgccatgcccgccacgggccttgcgctg
gaatggctggagatgtttcccggcttgccaatctccggtatgaccggcagcatcgccgcc
aactgtacgctgatgggcaaggagggcgatcactggttgctgcacctcgacccggcgcac
agcgcgctgttcaactcgacccagcaacgtcgtctgaacgacgcgttgaaccagttcacg
ggccgcacgatcaatctgtctatcgagctgatcaagcccgagcaggaaacccctgcccag
gccgcgtcgcgtttgcgtgccgagcgccagcgccaggccgaggcctcgattcatgccgat
ccgttcattcagcagatgctgcagcagtttggcgcgatgattcgagaagatacgatcaag
cctgtggatgctccggcagcgcagactcaataa
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