Pseudomonas viridiflava: CFBP1590__3642
Help
Entry
CFBP1590__3642 CDS
T06554
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
pvd
Pseudomonas viridiflava
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvd03000
]
CFBP1590__3642
Transcription factors [BR:
pvd03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CFBP1590__3642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13_2
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
SMS11228
UniProt:
A0A1Y6JMS1
LinkDB
All DBs
Position
I:complement(4011253..4011816)
Genome browser
AA seq
187 aa
AA seq
DB search
MSENARESILAAAKAAAQVHGYSGINFRSIADTVGIKNASIYYHFPSKADLGAAVARRYW
QDTAAVLEAIRDENTDPTRCLQLYPSIFRMSLENGNRLCLSSFMAAEYEDLPEEVKSEVK
AFADANVAWLARVLADAGLGSAEKCERRARAIFTAVAGAQLIARTHQDVGEFDELMLSYQ
DAGLFSV
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagaatgctcgggaatccatattggccgccgcgaaagctgcggctcaggtacac
ggctacagcgggatcaatttccgcagcatcgccgataccgtggggatcaagaacgctagc
atttactaccactttcccagcaaggccgacctcggggcggcggttgccagacgctactgg
caggacacggctgctgtgcttgaggcgattcgtgacgagaacaccgatccgacacgctgc
ctgcagctgtatccgtcgatctttcgcatgtcgctggagaacggcaaccggctgtgtctt
tccagtttcatggcggccgaatacgaagacctgcctgaggaagtgaagagcgaggtcaag
gcgtttgcagatgccaacgtggcatggcttgcccgggtgctcgctgacgcgggactggga
agcgcagaaaaatgcgaacgccgtgcgcgtgccattttcactgctgtggccggggcgcag
ttgatcgcccgaactcaccaggatgtcggcgagtttgatgaactgatgctcagttatcag
gatgcagggcttttttctgtgtga
DBGET
integrated database retrieval system
