Pseudomonas viridiflava: CFBP1590__3667
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Entry
CFBP1590__3667 CDS
T06554
Name
(GenBank) deoxyribodipyrimidine photolyase-like protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pvd
Pseudomonas viridiflava
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvd03400
]
CFBP1590__3667
Enzymes [BR:
pvd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
CFBP1590__3667
DNA repair and recombination proteins [BR:
pvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CFBP1590__3667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
SMS11253
UniProt:
A0A1Y6JSF1
LinkDB
All DBs
Position
I:4064201..4065739
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AA seq
512 aa
AA seq
DB search
MKAPQHLRLVLGDQLSFDLASLQDLNAECDTVLLVEVMEEATHVPHHPQKIILIFSAMRH
FADSLRERGFQVQYVALDDPDNTGSVPGELRRWQSLLQADEVHITECGDWRLEQSIRDTD
LPIQWHADGRFLCSRNEFSNWAQGKKQLRMEFFYREMRRKSGLLLNGDGTPVGGAWNFDV
ENRKALPKGVTAPYPARFAPDVITRQVMTLVKERFASHYGAVDTFDYPVTHADAQALWAY
FLDFGLAAFGDYQDAMASNEPFLFHARISAALNIGLLDLRQVCSDVEAAYWSGQIALNAA
EGFIRQLIGWREYVRGVYWLRMPEYATGNRFGNTRPLPEFYWTGDTKMNCMRQAIGQSLE
YAYAHHIQRLMVTGNFALLAGIAPTEICEWYLAIYMDAFDWVELPNTLGMVMHADGGYLG
SKPYCASGQYIKRMSNYCRDCHYKVSESTTEDACPFNALYWHFLMRHGDLLRSNQRLGMV
YKNLDRMNDAKLDALWNRGQTLLARLDAGESI
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacctcaacatctgcgccttgtcctcggcgatcagctgtctttcgacctggcg
tcgctgcaggatctgaacgcagaatgcgacacggttctgctggtcgaagtgatggaagaa
gccacccatgtgccgcatcacccgcaaaagatcatcctgatcttcagcgccatgcgccac
ttcgcagacagcctgcgcgaacgcggctttcaggtgcagtacgtcgccctcgatgatccg
gacaacacaggctcggtgcccggcgagctgcgccgctggcagtcgctgttgcaggctgac
gaagtgcacatcaccgaatgcggcgactggcgtctggagcagtcgatcagggacacggac
ctgccgatccagtggcatgccgatggccgcttcctgtgttcgcgcaacgaattctcgaac
tgggcgcagggcaagaagcagttgcgcatggaattcttttaccgcgaaatgcgccgcaag
agcgggctgctgctcaatggcgacggcacaccggtgggcggcgcctggaacttcgacgtc
gaaaaccgcaaggcgctgcccaaaggcgtcaccgccccctaccccgcacgcttcgcgcca
gacgtcatcacccggcaggtcatgacactggtgaaagagcgcttcgccagccactacggc
gctgtggacacgttcgattacccggtcacccacgccgatgcccaagcgctctgggcgtac
tttctggatttcggtctggccgccttcggtgactatcaggatgccatggccagcaacgag
ccgttcctgttccatgcccgcatcagcgccgccctgaacatcggtctactggatctgcgt
caggtgtgcagcgatgtggaagccgcttactggtcggggcagattgccctgaatgccgcc
gagggcttcattcgtcagttgatcggctggcgcgagtatgtgcgcggcgtgtactggctg
agaatgccggaatacgccaccggcaaccggttcggcaacacccgaccgcttccagagttc
tactggaccggtgacacgaagatgaactgcatgcgtcaggccatcggccaaagcctggaa
tacgcctacgcgcaccacattcaacgcttgatggtgaccggcaacttcgccctgctcgcc
ggcatcgcaccgactgaaatctgcgagtggtatctggcgatctacatggacgccttcgac
tgggtcgaactgcccaacacgctgggcatggtcatgcacgccgacggcgggtatctgggc
tccaagccctactgcgccagcggccagtacatcaagcgcatgtccaattactgccgcgac
tgccactataaagtgagcgaaagcaccaccgaagacgcctgcccgttcaacgcgctgtac
tggcatttcctgatgcgccacggcgacctgctgcgcagcaatcaacgcctggggatggtg
tacaaaaacctcgaccgtatgaacgacgccaagctggacgccctttggaatcgaggccag
acgctgctcgccagactggacgccggggagtcgatttga
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