Pseudomonas viridiflava: CFBP1590__3701
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Entry
CFBP1590__3701 CDS
T06554
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd03030
DNA replication
pvd03430
Mismatch repair
pvd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFBP1590__3701 (dnaQ)
03430 Mismatch repair
CFBP1590__3701 (dnaQ)
03440 Homologous recombination
CFBP1590__3701 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvd03032
]
CFBP1590__3701 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pvd03400
]
CFBP1590__3701 (dnaQ)
Enzymes [BR:
pvd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFBP1590__3701 (dnaQ)
DNA replication proteins [BR:
pvd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFBP1590__3701 (dnaQ)
DNA repair and recombination proteins [BR:
pvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFBP1590__3701 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
SMS11287
UniProt:
A0A0D0M6Y8
LinkDB
All DBs
Position
I:complement(4105849..4106628)
Genome browser
AA seq
259 aa
AA seq
DB search
MALQNTDNRSIVLDTETTGMPVTDGHRIIEIGCVELIGRRLTGRHFHVYLQPDRESDEGA
IGVHGITNEFLVGKPRFAEVADEFFEFIKGAQLIIHNAAFDVGFINNEFALMGAHDKTDI
TQHCTVLDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLAMTGG
QTSLSLAGNASDGNGSDGGSSNRGSEIRRLPADRTPCRIIHASESELAEHEVRMSTIAKA
SGAPALWVQLLEAQAQASS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcattgcaaaacacagacaacagatcgatcgtactcgacaccgaaaccactggtatg
ccggtgaccgacgggcaccgcatcatcgagatcggttgcgtcgagctgatcggccgtcgc
ctgaccgggcggcattttcacgtttacctgcaacctgatcgcgagagtgatgaaggcgcc
atcggcgtgcacggtatcaccaacgaatttctggtcggcaagccgcgctttgccgaagtc
gccgatgaattcttcgagttcatcaagggcgctcagctgatcatccacaacgcggcgttc
gacgttggcttcatcaacaacgaatttgcgttgatgggcgctcacgacaagaccgacatc
acccagcactgtacggtgctcgacaccctgatgatggcccgcgagcggcatccggggcag
cgcaacagccttgatgcactctgcaagcgctacggcgtcgacaactcgggtcgtgaactg
cacggcgccttgctcgactccgagattctggctgacgtctatctggcaatgaccggcgga
cagaccagtctgtcgctggcgggcaatgcgtccgatggcaatggttcggatggcgggtcg
agcaatcgtggcagcgaaatccgccgcctgcctgccgatcgcaccccgtgccgaatcatt
catgccagcgaaagtgaactggccgagcatgaagtgcgtatgtctacgatcgccaaggca
tccggcgcgcctgcgctgtgggtgcaactgctggaggcccaggcgcaggcttcatcctga
DBGET
integrated database retrieval system
