Pseudomonas viridiflava: CFBP1590__3843
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Entry
CFBP1590__3843 CDS
T06554
Name
(GenBank) multidrug/toxin efflux protein, ATP-binding and membrane protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CFBP1590__3843
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvd02000
]
CFBP1590__3843
02044 Secretion system [BR:
pvd02044
]
CFBP1590__3843
Transporters [BR:
pvd02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CFBP1590__3843
Secretion system [BR:
pvd02044
]
Type I secretion system
Adhesin protein transporter
CFBP1590__3843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_21
AAA_16
AAA_29
DUF87
AAA_22
MMR_HSR1
nSTAND3
AAA_18
Motif
Other DBs
NCBI-ProteinID:
SMS11429
UniProt:
A0A1Y6JNR4
LinkDB
All DBs
Position
I:4275774..4277945
Genome browser
AA seq
723 aa
AA seq
DB search
MLLNSLKIPDADTHEASFTEVEDPLLDGLVLLCRLHGRAHSRTSLCTGLPMSNQRLEPSL
MPRAAARAGLQARWLRRDLEQIDALNLPVLLLLKDQHCAVLVRRDESGRLLILPSENQGG
EQWVAPEQLAQRYTGQALFASPHHELEQLRSPLLPRVTSWFRDTARLSRRLYGDAILASL
LINVLGLMVPLFVMQTYDRVVPNQATATLWVLAIGLLIGTLFEMGLRLIRARLLDQAGSK
TDLILSATLFERIVGMNLKARPATVGGFAQSIHDFQGLREFLTAVTLTSLIDLPFAILML
AVIGLLGGWLVLIPLLAFPLTVAFAWAIQIRLRDTVQKSLSLGAARQALLIETLGGLETL
KACNAQNERQHQWESTHGALTRLDSHARHLAAIASNGTLFVQQFCGMATLVAGVYSIVGG
HLSVGALVATYMLGSRVLAPLGQVAGLITRYQQAQLTMKSTDALMALPQEQAQEKRPLQT
PPLKGAVSISNLRFAYEPKGATALNGVRFRLEPGERVGIIGRSGSGKSTLARLLMGFHTP
DEGQVLLDNLDLQQLDISELRQQIGYVAHDLPLLAGSLRDNLLLGARQVSDTRMLEVARI
TGVDELALRHPRGFDRPVGERGQLLSGGQRQSVLLARALLLDPPILLLDEPTSHMDNASE
EHLRQHLHRLIPGKTLLLITHRLSMLTLVDRILVLDQGKLVADGPKDAVIEALRKGQIGP
APF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgaacagtctgaaaatccctgacgccgatacgcatgaagcatcgttcaccgag
gtcgaggacccgttgctcgacggcctggtgctgctctgccgattgcatggccgcgcccac
agtcgcaccagcctgtgtaccggcctgccgatgagcaatcagcggctggagccttcgcta
atgccacgagccgctgcccgcgccggtctgcaggcgcgctggctgcgtcgcgatctggaa
cagatcgacgcgctgaacctgcccgtgctgctgttgctgaaggaccagcattgcgcggtg
ctggtgcgtcgtgacgaatcaggccgattgctgatcctgccctcggaaaaccagggcggc
gagcagtgggtcgcgcctgaacaactggcgcagcgctacactggtcaggcgctgttcgcc
agcccgcaccatgaactggaacaactgcgctcgcctctgctgcccagagtgacctcctgg
tttcgcgacaccgcaagactgtcccgaagactgtatggcgacgcgattctcgccagcctg
ctgatcaatgtgctcggcctgatggtccccctgttcgtcatgcagacctacgaccgcgtg
gtgcccaatcaggccaccgcgaccctttgggtgctggccatcggtctgctgatcggcacg
ctgttcgaaatgggactgcgcctgatccgcgcccggctgctggatcaggcgggcagcaag
acggacctgatcctttccgcgacgctgttcgagcgcatcgtcggcatgaacctcaaggcg
cgcccggccacggtcggcggcttcgcccagagcattcatgactttcagggactgcgcgag
ttcctgaccgccgtgaccctgacaagcctgattgacctgcccttcgcgatcctgatgctg
gcggtcatcggtctgctgggcggctggctggtgttgattccactgctggcctttccactg
acggtcgcctttgcctgggcgattcagattcgtctgcgcgacacggtgcagaaaagcctg
agtctgggtgccgcgcgtcaggccttgctgatcgaaaccctcggcggcctggaaacgctc
aaggcctgcaacgcccagaatgaacgtcagcatcagtgggaaagcacccacggtgccctg
acccgactggacagccacgcccgtcacctcgccgcaatcgccagcaacggcacactgttc
gtgcagcagttctgcggcatggccacgctcgtcgccggggtctacagcatcgtcggcggg
cacctgagcgtcggtgcgctggtggcgacttacatgttggggagccgggtgctggcgccg
ctcgggcaagtcgcggggctgatcacccgctaccagcaggcgcaactgacgatgaaaagc
accgacgcgttgatggcattgcctcaggaacaggcgcaggaaaaacgcccgttgcaaaca
cccccgctcaagggcgcggtgagcatcagcaacctgcgttttgcctatgaacccaagggt
gcaacggcgctgaacggggttcgtttcagactggaacccggagagcgcgtcggcatcatt
ggccgcagcggctcgggcaaaagcacactggctcgtctgctgatggggtttcacacgccg
gacgaaggtcaggtgctgctcgacaacctggacctgcagcagttggatatcagcgaactg
cgccaacagatcgggtacgtcgcccatgatttgccgctgctggcaggcagtctgcgcgac
aacctgttactgggcgctcgccaggtgagcgacacgcgcatgctggaagtggcgcgcatc
accggcgtcgatgagctggcgctgcgtcatccgcgaggcttcgaccggcccgtcggcgag
cgcggccagttgctctccggcgggcagcgacaaagcgttttgctggcgcgcgccctgctg
ctggacccgcctattctgttgctcgacgagcctaccagccacatggacaacgccagcgaa
gaacatctgcgccaacacctgcatcgcctgattcccggcaagaccctgctgttgatcacc
catcgtctgtcgatgctgaccctggtcgaccgcatactggtgctcgaccaaggcaagctg
gttgcagacggcccgaaggacgctgtcatcgaagcactgcgcaagggccagatcggcccg
gcgccgttttga
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