Pseudomonas viridiflava: CFBP1590__3905
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Entry
CFBP1590__3905 CDS
T06554
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pvd
Pseudomonas viridiflava
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvd03000
]
CFBP1590__3905
Transcription factors [BR:
pvd03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CFBP1590__3905
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_26
Motif
Other DBs
NCBI-ProteinID:
SMS11491
UniProt:
A0A1Y6JQR4
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All DBs
Position
I:4347124..4348188
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AA seq
354 aa
AA seq
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MQSKVKRITIKDVAQAAGVSFQTVSLVINHPEKVAKRTLAKVQDVIRELNFVPSVAARSL
RNIPIKTVACIFFGERAAYDNRSPQIQDTYWNSVIQSLGLAADEVGYSLLQRKPSAHQAP
AVEEILELYRSGSIVGIVAVVEQPDHPVLIELSRNNVPIVLFGTIDPNFMYVAQANRLAT
AQLVDHLHSVGCRKIAFIAGEREGHTNQDIDERYLGYQEGVSKHNLLVNEHWNIAGDWSM
ASGLRVAQQLCAGITRPDAMIFASDRMALGALKGLYDLGLRVPHDICVVGFDNMQYDDFS
IPTLTSVDSPLFEMATTAIELLLKTLTGLSVNDSAQMIFPAKIIIRDSTRRLIG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcaaagtaaaaaggatcaccataaaggacgtggcgcaagcagccggggtgagc
ttccagaccgtatcgctggttataaaccatcctgaaaaagtcgccaagagaaccctggca
aaggttcaggacgtgatccgcgaattgaatttcgtacccagcgtggctgctcgttccctg
agaaatattccaataaaaacggtcgcatgtatatttttcggcgagcgcgccgcctatgac
aatcgttcgccacagattcaggacacctactggaacagcgtgattcagtcgcttggcctg
gctgcggacgaggtgggttattcgcttctgcaacgtaaaccctcagcacatcaagcaccg
gcagtcgaagaaatactcgagctttaccgttcaggcagcatcgtcggcatcgttgcggtg
gttgagcagcccgatcatcccgttctgatagaactcagccgcaacaatgtaccgattgtt
ctttttggcaccatagacccgaactttatgtatgttgcgcaggccaacaggctcgccact
gcgcaactcgttgaccaccttcacagtgttgggtgtcgcaagatcgctttcatcgcgggt
gaaagagagggtcacaccaatcaagatatcgacgaacgctatctgggttatcaggagggg
gtgagcaaacataacctgttggtaaacgaacactggaacatcgccggtgactggtccatg
gccagtggacttcgcgtagcgcaacagttatgcgcgggcatcacccgtccggatgcaatg
atttttgccagcgatcgtatggcactgggggccctcaaaggcttgtacgatttaggcctg
cgagtcccccacgatatctgcgtggtcggattcgacaatatgcaatatgacgacttcagc
atccccaccctcaccagcgtcgactcgccactgtttgagatggccacgacagcgatagaa
cttctgcttaaaacgcttaccggactttccgtcaacgactccgcgcagatgattttcccg
gcaaaaatcatcatcagggacagcacacgacgtttgatcggctga
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