Pseudomonas viridiflava: CFBP1590__3981
Help
Entry
CFBP1590__3981 CDS
T06554
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CFBP1590__3981 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvd01007
]
CFBP1590__3981 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvd03016
]
CFBP1590__3981 (aspS)
03029 Mitochondrial biogenesis [BR:
pvd03029
]
CFBP1590__3981 (aspS)
Enzymes [BR:
pvd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
CFBP1590__3981 (aspS)
Amino acid related enzymes [BR:
pvd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CFBP1590__3981 (aspS)
Transfer RNA biogenesis [BR:
pvd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CFBP1590__3981 (aspS)
Prokaryotic type
Other AARSs
CFBP1590__3981 (aspS)
Mitochondrial biogenesis [BR:
pvd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CFBP1590__3981 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
SMS11567
UniProt:
A0A0P6WLM1
LinkDB
All DBs
Position
I:complement(4424126..4425901)
Genome browser
AA seq
591 aa
AA seq
DB search
MMRSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADTFAA
ADRVRSEYVVKVVGKVRARPAGAVNPNMASGAIEVLGYELEVLNESETPPFPLNEYSDVG
EETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYL
VPSRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETS
FLDEKDIIGLTEKMVRQLFKEVLDLEFGEFPHMTFEEAMRRYGSDKPDLRNPLELVDVAD
QLKEVEFKVFSGPANDPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNER
ANGVDGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKVGNDL
KLHTCEWAPMWVVDFPMFEENDDGSFTALHHPFTAPKCTPEELEANPATALSRAYDMVLN
GTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGLDRLV
MLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPKAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcagccattattgcggccaactgaacgagagcctggaaggtcaggaaattacc
ctttgcggatgggtccaccgtcgtcgtgaccatggaggcgttatcttcctcgatatccgc
gaccgtgaaggcatggctcaagtggtgttcgaccctgatcgtgcagacaccttcgccgct
gccgaccgtgttcgcagcgaatatgtggtcaaggttgtcggcaaggtccgtgcgcgtcct
gccggtgccgtgaaccccaacatggcctcgggtgccatcgaagtgctgggctatgagctg
gaagtgctgaacgagtcggaaaccccgccgttcccgctgaacgaatactccgatgtcggc
gaagagacccgcctgcggtatcgcttcatcgacctgcgtcgcccggaaatggctgaaaag
ctgcgtctgcgttcgcgcatcaccaccagcatccgtcgttatctggatgacaacggcttc
ctcgatgtcgagacgccgatcctgacgcgggccacgccggaaggcgctcgcgactatctg
gtcccgagccgcacacacccgggcagcttctttgcgttgccgcaatcgcctcagttgttc
aagcagctactgatggttgccggtttcgaccgctactaccagattgccaagtgcttccgt
gacgaagacctgcgtgccgaccgccagccggaattcacccagatcgacatcgagaccagc
tttctcgacgagaaggacatcatcggtctgaccgagaagatggtccgtcagctgttcaag
gaagtccttgatctggaattcggcgaattcccgcacatgactttcgaagaagccatgcgc
cgttatggctccgacaagccggacctgcgtaacccgctggaactggtcgacgtggccgat
cagctcaaggaagtcgagttcaaggtattcagcggcccggcaaacgatccgaagtgccgc
atcgctgcactgcgtgttccaggcggcgcgagcatgccccgcaagcagatcgacgactac
accaagttcgtcggcatctacggtgccaagggtctggcgtacatcaaggtcaacgagcgc
gccaacggtgttgatggcctgcagtcgccgatcgtcaagaacatccctgaagccaacctc
aacgtgatccttgatcgcgtcggtgcggtggatggcgatatcgtgttcttcggtgctgac
aaggccaagatcgtcagcgaagcgctgggcgcactgcgcatcaaggtcggtaacgatctg
aagctgcacacctgcgagtgggctccgatgtgggtcgtcgacttcccgatgttcgaagaa
aacgacgacggcagcttcaccgcgttgcaccaccccttcactgcacccaagtgcacgcct
gaagagctggaagccaacccggccactgcgttgtcccgtgcctacgacatggtcctgaac
ggcaccgagctgggtggcggttcgatccgtatccatcgcaaggaaatgcaacaggcggta
ttccgtctgctgggcatcgccgaagacgagcagcaggagaagttcggcttcctgctggac
gctctgaaatacggcgcgccaccgcacggtggtctggcgttcggtctggatcgtctggtg
atgctgatgactggcgctcagtcgattcgtgaagtcattgccttcccgaaaacccagagc
gctgcggacgtcatgacccaggcgccgggtgtcgttgacgccaaggccctgcgtgaactg
cacattcgcctgcgcgagcagccaaaggccgagtga
DBGET
integrated database retrieval system
