Pseudomonas viridiflava: CFBP1590__4083
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Entry
CFBP1590__4083 CDS
T06554
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CFBP1590__4083 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvd01007
]
CFBP1590__4083 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvd03016
]
CFBP1590__4083 (lysS)
Enzymes [BR:
pvd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CFBP1590__4083 (lysS)
Amino acid related enzymes [BR:
pvd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CFBP1590__4083 (lysS)
Transfer RNA biogenesis [BR:
pvd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CFBP1590__4083 (lysS)
Prokaryotic type
Other AARSs
CFBP1590__4083 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
SMS11669
UniProt:
A0A1Y6JPG1
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All DBs
Position
I:complement(4534665..4536266)
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AA seq
533 aa
AA seq
DB search
MSAVLCKRPGRLSALPANPDEPGQRTCDGMTEDMSDQQLDPQALQQEENTLIALRKEKLA
AGRAKGQAFPNDFRRDSYCNDLQKQYVDKTKEDLAAAAIPVKVAGRIMLNRGSFMVIQDM
TGRIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTLARSGKGDLYVEMTSVRLLTKSLRP
LPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQ
TIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHN
PEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFVRLSVFDS
ILKYNPELTAADLQDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELVEHKLEQPHFITQ
YPFEVSPLARRNDDNPSVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDD
EAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMRPQA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcggtcctgtgcaagcgtccgggacggctatccgccttgcccgcgaacccggat
gaaccggggcaacgaacctgtgatggaatgactgaagacatgagcgaccaacaactcgac
ccgcaagccctgcaacaggaagaaaacaccctgatcgccctgcgcaaggaaaagcttgct
gccggccgtgccaagggtcaggccttcccgaatgacttccgccgcgacagctactgcaac
gacctgcagaaacagtacgtcgacaagaccaaggaagatctggctgcggcagcgattccg
gtcaaggttgccggtcgcatcatgctcaaccgtggctcgttcatggtgattcaggacatg
accggtcgcatccaggtctacgtcaaccgcaagacactgccggaagaaaccctggccgaa
gtcaagacctgggacctgggcgatatcattgccgccgaaggcaccctggcccgttccggc
aagggtgacctttatgttgaaatgacgtccgtgcgcctgctgaccaagtcgctgcgtccg
ctgcctgacaaacaccacggcctgaccgacaccgaacagcgctatcgccagcgttacgtc
gacctgatcgtcaacgaagacgtgcgcgagaccttccgcgtgcgttcgcaggtgattgcc
cacatccgcagcttcctgatgaagcgcgacttcctcgaagtcgaaacgccgatgctgcag
accattcctggtggcgcggcggccaagccgttcgaaacccaccacaacgcgctggacatg
gaaatgttcctgcgtatcgcgcctgagctgtacctcaagcgtctggttgtcggtggcttc
gagaaggtgttcgagatcaaccgcaacttccgtaacgaaggcgtttcgacccggcacaac
cccgagttcaccatgctcgagttctaccaggcctacgccgactacgaagacaacatggat
ctgaccgaggagctgttccgcgaactggctcaactggttctgggcaccaccgatgtgccg
tatggcgacaaggtgttccacttcggcgaaccgttcgtgcgcctgtcggtgttcgactcg
atcctcaagtacaaccctgaactgaccgcagccgatctgcaggacatcgacaaggcacgc
gccatcgccaagaaggccggtgccaaggtcctgggcttcgaaggtctgggcaagctgcag
gtgatgattttcgaagagctggtcgagcacaagctggaacagccgcacttcatcacccag
tacccgttcgaagtttcgccactggcacgtcgcaacgatgacaatccgagcgtcaccgac
cgcttcgagctgttcatcggcggccgcgaaattgccaacgcctattccgagctcaatgac
gcggaagaccaggccgaacgcttccaggctcaggttgccgacaaggacgccggtgacgac
gaggccatgcactatgacgccgatttcgtacgtgcgctggagtacggcatgccgccgaca
gccggtgaggggatcggtatcgaccgcctggtgatgctgctcaccaactcgccgtcgatc
cgggatgtgatcctgtttccgcacatgcgcccgcaggcgtaa
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