Pseudomonas viridiflava: CFBP1590__4107
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Entry
CFBP1590__4107 CDS
T06554
Symbol
xerD
Name
(GenBank) Tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pvd
Pseudomonas viridiflava
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvd03036
]
CFBP1590__4107 (xerD)
Chromosome and associated proteins [BR:
pvd03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CFBP1590__4107 (xerD)
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
GLTP
Motif
Other DBs
NCBI-ProteinID:
SMS11693
UniProt:
A0A0D0MXX8
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Position
I:complement(4565836..4566732)
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AA seq
298 aa
AA seq
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MPAIDHPLIDQFLDALWLEKGLSDNTRDAYRSDLALFHGWLQERNVDLATAGREAILDHL
AWRVDQAYKPRSTARFLSGARGFYRYLLREKLIAVDPTLQVDMPQLGKPLPKSLSEADVE
ALLAAPDLSEPIGERDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLV
PMGEEAIVWVERYMRGARDELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHQAMVAGIDKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDLHARHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccatcgaccacccgctgattgaccagtttctcgacgccctctggctggagaag
ggcctgtccgacaacacccgagacgcctatcgcagcgatctggccctgtttcacggctgg
ctgcaggaacgcaacgtggatctggccactgccgggcgcgaggccattctcgatcatctg
gcctggcgggtggatcaagcctacaagccgcgctcgaccgcgcggtttctgtctggcgcc
cggggtttctatcgttacctgctgcgcgaaaagctgatcgctgtcgatcccaccctgcag
gtcgacatgccgcaactgggcaagccgctgcccaagtcgctgtccgaagctgacgtcgaa
gcgcttctggcggcgcccgacctgagtgagcccattggcgagcgggaccgggcaatgctg
gaggtgctttatgcctgtggtctgcgggtgaccgagctgatcagtctgacgctggagcag
gtcaatctgcgccagggcgtgctgcgggtgatgggcaagggcagcaaggagcgtctggtt
ccgatgggtgaggaagccatcgtctgggtcgaacggtacatgcgcggtgcccgcgacgaa
ctgttgaacggtcgacccagtgatgtgctgtttcccagccagcgcggcgaacagatgacc
cgccagactttctggcatcggatcaagcatcaggccatggtcgcgggcatcgataaatcc
ctgtccccgcacacgctgcgccatgcgtttgccacgcatctgctcaaccacggtgccgat
cttcgtgtggtgcaaatgttgctgggtcacagcgatttgtccacgacgcaaatctacact
catgtggcacgtgccaggcttcaggatctgcatgccaggcatcatccgcgagggtag
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