Pseudomonas viridiflava: CFBP1590__4258
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Entry
CFBP1590__4258 CDS
T06554
Name
(GenBank) Conserved hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
pvd
Pseudomonas viridiflava
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvd03032
]
CFBP1590__4258
03036 Chromosome and associated proteins [BR:
pvd03036
]
CFBP1590__4258
03400 DNA repair and recombination proteins [BR:
pvd03400
]
CFBP1590__4258
DNA replication proteins [BR:
pvd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CFBP1590__4258
Chromosome and associated proteins [BR:
pvd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CFBP1590__4258
DNA repair and recombination proteins [BR:
pvd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CFBP1590__4258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
NTS
HTH_IclR
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
SMS11844
UniProt:
A0A0D0LGD8
LinkDB
All DBs
Position
I:complement(4720880..4721161)
Genome browser
AA seq
93 aa
AA seq
DB search
MALTKDQLIADIAEAIDAPKTTARNALEQLGQIVADQLENGAEITLPGIGKLKVTERPAR
TGRNPSTGAAIEIAAKKVVKFVPAKVLTDSINK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctcttactaaagaccaattgatcgccgatatcgctgaagctatcgacgcgccaaaa
accacagcgcgtaatgctcttgagcaattgggccaaatcgttgccgaccagttggaaaac
ggcgcagaaatcaccctgccaggcatcggcaagctgaaagtcaccgagcgtccagctcgc
actggccgtaacccttcgactggcgcagccatcgaaatcgctgccaagaaagtcgtcaag
ttcgtaccagccaaagtgctgaccgactcgatcaacaagtaa
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